RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	YBR053C	P38235	358 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	ARB1	P40024	610 aa	Known RBP	4.17	□□□□□ -1.74
DSL1	YNL258C	VFA1	P40080	203 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	BSC5	P53755	489 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	YPL071C	Q02864	156 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	NGL3	Q03210	505 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-DR2	Q03483	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	YDR131C	Q03899	556 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	SPC19	Q03954	165 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-B	Q12260	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-OR2	Q12293	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-DR1	Q12392	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-OR1	Q12439	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TY2A-DR3	Q99303	438 aa		4.17	□□□□□ -1.74
DSL1	YNL258C	TUB2	P02557	457 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	TUF1	P02992	437 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	OPI1	P21957	404 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	ROX1	P25042	368 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	FEN2	P25621	512 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	CDC20	P26309	610 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	RPS7A	P26786	190 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	VMA8	P32610	256 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	AXL1	P40851	1208 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	GPD2	P41911	440 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	CTH1	P47976	325 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	COG1	P53079	417 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	DUO1	P53168	247 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	VPS75	P53853	264 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	NMD4	Q12129	218 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	VPS33	P20795	691 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	TEF4	P36008	412 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	COS111	P38308	924 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
DSL1	YNL258C	YJR061W	P40355	935 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	ARC1	P46672	376 aa	Known RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	MRX6	P48564	524 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	YPL272C	Q08984	517 aa		4.16	□□□□□ -1.74
DSL1	YNL258C	RRG1	Q12167	365 aa	Predicted RBP	4.16	□□□□□ -1.74
DSL1	YNL258C	CET1	O13297	549 aa	Predicted RBP	4.15	□□□□□ -1.74
DSL1	YNL258C	HSP82	P02829	709 aa	Known RBP	4.15	□□□□□ -1.74
DSL1	YNL258C	COQ2	P32378	372 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	NUP60	P39705	539 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	RFX1	P48743	811 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	TEL2	P53038	688 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	COX18	P53239	316 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	PIL1	P53252	339 aa	Known RBP	4.15	□□□□□ -1.74
DSL1	YNL258C	NRG1	Q03125	231 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	GCN5	Q03330	439 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	VPS64	Q03944	604 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	RCO1	Q04779	684 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	GAD1	Q04792	585 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	PSR1	Q07800	427 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	YPR053C	Q6Q5F3	151 aa		4.15	□□□□□ -1.74
DSL1	YNL258C	CAF20	P12962	161 aa	Known RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	CKA1	P15790	372 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	TSA1	P34760	196 aa	Known RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	YKL050C	P35736	922 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	LRP1	P38801	184 aa	Known RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	ICP55	P40051	511 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	LTP1	P40347	161 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	MDR1	P53258	950 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	INN1	P53901	409 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	SYF1	Q04048	859 aa	Predicted RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	SXM1	Q04175	944 aa	Known RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	ENT4	Q07872	247 aa		4.15	□□□□□ -1.75
DSL1	YNL258C	PRS5	Q12265	496 aa	Known RBP	4.15	□□□□□ -1.75
DSL1	YNL258C	MET17	P06106	444 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	LAT1	P12695	482 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	SWI3	P32591	825 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	MTH1	P35198	433 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	APT2	P36973	181 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	UBP13	P38187	747 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	APE4	P38821	490 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	UME6	P39001	836 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	PLB1	P39105	664 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	YIL077C	P40508	320 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	LSB3	P43603	459 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	NGL2	Q03264	515 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	USA1	Q03714	838 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	STP3	Q05937	343 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	YLR345W	Q06137	509 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	PSK2	Q08217	1101 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	RPP2A	P05319	106 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	RPS9B	P05755	195 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	PGS1	P25578	521 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	SPO22	P40511	975 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	YML6	P51998	286 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	YGR054W	P53235	642 aa	Known RBP	4.14	□□□□□ -1.75
DSL1	YNL258C	YLR224W	Q05947	369 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	GRX6	Q12438	231 aa		4.14	□□□□□ -1.75
DSL1	YNL258C	ARG3	P05150	338 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	TPK1	P06244	397 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	PET122	P10355	254 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	YCK1	P23291	538 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	ERG8	P24521	451 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	YCR061W	P25639	631 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	CNS1	P33313	385 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	LST4	P34239	828 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	MAC1	P35192	417 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms