RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C EMP70P32802 667 aa5.37□□□□□ -1.55
SCL1YGL011C TDP1P38319 544 aa5.37□□□□□ -1.55
SCL1YGL011C ERR3P42222 437 aa5.37□□□□□ -1.55
SCL1YGL011C CPR6P53691 371 aaKnown RBP5.37□□□□□ -1.55
SCL1YGL011C VMS1Q04311 632 aaKnown RBP5.37□□□□□ -1.55
SCL1YGL011C CIA1Q05583 330 aa5.37□□□□□ -1.55
SCL1YGL011C POL3P15436 1097 aa5.36□□□□□ -1.55
SCL1YGL011C BET2P20133 325 aa5.36□□□□□ -1.55
SCL1YGL011C VPS34P22543 875 aa5.36□□□□□ -1.55
SCL1YGL011C MCM3P24279 971 aaKnown RBP5.36□□□□□ -1.55
SCL1YGL011C DBF20P32328 564 aa5.36□□□□□ -1.55
SCL1YGL011C CCL1P37366 393 aa5.36□□□□□ -1.55
SCL1YGL011C MUP3P38734 546 aa5.36□□□□□ -1.55
SCL1YGL011C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SCL1YGL011C SUT2Q12286 268 aa5.36□□□□□ -1.55
SCL1YGL011C MSM1P22438 575 aa5.35□□□□□ -1.55
SCL1YGL011C RIT1P23796 513 aa5.35□□□□□ -1.55
SCL1YGL011C IDS2P46958 469 aa5.35□□□□□ -1.55
SCL1YGL011C ASN1P49089 572 aaKnown RBP5.35□□□□□ -1.55
SCL1YGL011C VPS64Q03944 604 aa5.35□□□□□ -1.55
SCL1YGL011C IWR1Q07532 353 aaPredicted RBP5.35□□□□□ -1.55
SCL1YGL011C ICL2Q12031 575 aa5.35□□□□□ -1.55
SCL1YGL011C CTT1P06115 562 aa5.34□□□□□ -1.55
SCL1YGL011C TPK2P06245 380 aa5.34□□□□□ -1.55
SCL1YGL011C ADE3P07245 946 aaKnown RBP5.34□□□□□ -1.55
SCL1YGL011C GFA1P14742 717 aaKnown RBP5.34□□□□□ -1.55
SCL1YGL011C MRS6P32864 603 aaKnown RBP5.34□□□□□ -1.55
SCL1YGL011C LOT5P34234 306 aa5.34□□□□□ -1.55
SCL1YGL011C YBR138CP38277 524 aa5.34□□□□□ -1.55
SCL1YGL011C PIH1P38768 344 aa5.34□□□□□ -1.55
SCL1YGL011C ARB1P40024 610 aaKnown RBP5.34□□□□□ -1.55
SCL1YGL011C QRI1P43123 477 aaKnown RBP5.34□□□□□ -1.55
SCL1YGL011C SAP4P53036 818 aa5.34□□□□□ -1.55
SCL1YGL011C YGR021WP53212 290 aa5.34□□□□□ -1.55
SCL1YGL011C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SCL1YGL011C TRX2P22803 104 aaKnown RBP5.33□□□□□ -1.56
SCL1YGL011C PTH2P34222 208 aa5.33□□□□□ -1.56
SCL1YGL011C YPT10P38146 199 aa5.33□□□□□ -1.56
SCL1YGL011C SDH8P38345 138 aa5.33□□□□□ -1.56
SCL1YGL011C PUG1P40100 303 aa5.33□□□□□ -1.56
SCL1YGL011C STU2P46675 888 aa5.33□□□□□ -1.56
SCL1YGL011C ARC35P53731 342 aaKnown RBP5.33□□□□□ -1.56
SCL1YGL011C YDL073WQ07454 984 aa5.33□□□□□ -1.56
SCL1YGL011C YPK1P12688 680 aaKnown RBP5.32□□□□□ -1.56
SCL1YGL011C NCP1P16603 691 aaKnown RBP5.32□□□□□ -1.56
SCL1YGL011C YCR061WP25639 631 aa5.32□□□□□ -1.56
SCL1YGL011C CDC5P32562 705 aa5.32□□□□□ -1.56
SCL1YGL011C CAB2P40506 365 aa5.32□□□□□ -1.56
SCL1YGL011C SAP185P40856 1058 aa5.32□□□□□ -1.56
SCL1YGL011C YGL117WP53133 265 aa5.32□□□□□ -1.56
SCL1YGL011C ESF2P53743 316 aaKnown RBP5.32□□□□□ -1.56
SCL1YGL011C AIM6Q07716 390 aa5.32□□□□□ -1.56
SCL1YGL011C TGS1Q12052 315 aa5.32□□□□□ -1.56
SCL1YGL011C ZPS1Q12512 249 aa5.32□□□□□ -1.56
SCL1YGL011C CPA2P03965 1118 aaKnown RBP5.31□□□□□ -1.56
SCL1YGL011C MIS1P09440 975 aaKnown RBP5.31□□□□□ -1.56
SCL1YGL011C RNR3P21672 869 aaKnown RBP5.31□□□□□ -1.56
SCL1YGL011C EXO84P38261 753 aa5.31□□□□□ -1.56
SCL1YGL011C YEL020CP39994 560 aa5.31□□□□□ -1.56
SCL1YGL011C COQ6P53318 479 aa5.31□□□□□ -1.56
SCL1YGL011C CPR8P53728 308 aa5.31□□□□□ -1.56
SCL1YGL011C YNL092WP53934 400 aa5.31□□□□□ -1.56
SCL1YGL011C CRF1Q04930 467 aa5.31□□□□□ -1.56
SCL1YGL011C BLS1Q06071 122 aa5.31□□□□□ -1.56
SCL1YGL011C LEU2P04173 364 aaPredicted RBP5.3□□□□□ -1.56
SCL1YGL011C CLB4P24871 460 aa5.3□□□□□ -1.56
SCL1YGL011C ARP2P32381 391 aaKnown RBP5.3□□□□□ -1.56
SCL1YGL011C ARO9P38840 513 aaPredicted RBP5.3□□□□□ -1.56
SCL1YGL011C ARA2Q04212 335 aa5.3□□□□□ -1.56
SCL1YGL011C WHI2P12611 486 aa5.29□□□□□ -1.56
SCL1YGL011C YCL049CP25577 312 aa5.29□□□□□ -1.56
SCL1YGL011C YIL166CP40445 542 aa5.29□□□□□ -1.56
SCL1YGL011C IMA1P53051 589 aa5.29□□□□□ -1.56
SCL1YGL011C YML119WQ03208 357 aa5.29□□□□□ -1.56
SCL1YGL011C SPO11P23179 398 aa5.28□□□□□ -1.56
SCL1YGL011C SAT4P25333 603 aaKnown RBP5.28□□□□□ -1.56
SCL1YGL011C TAM41P53230 385 aa5.28□□□□□ -1.56
SCL1YGL011C GTR1Q00582 310 aa5.28□□□□□ -1.56
SCL1YGL011C GIS1Q03833 894 aa5.28□□□□□ -1.56
SCL1YGL011C ARG7Q04728 441 aa5.28□□□□□ -1.56
SCL1YGL011C PCL8Q08966 492 aa5.28□□□□□ -1.56
SCL1YGL011C RPN13O13563 156 aa5.27□□□□□ -1.57
SCL1YGL011C AAC1P04710 309 aa5.27□□□□□ -1.57
SCL1YGL011C AMD2P22580 549 aa5.27□□□□□ -1.57
SCL1YGL011C YMC1P32331 307 aa5.27□□□□□ -1.57
SCL1YGL011C GDA1P32621 518 aa5.27□□□□□ -1.57
SCL1YGL011C APM1Q00776 475 aaPredicted RBP5.27□□□□□ -1.57
SCL1YGL011C ATG21Q02887 496 aa5.27□□□□□ -1.57
SCL1YGL011C PSR2Q07949 397 aa5.27□□□□□ -1.57
SCL1YGL011C SUL2Q12325 893 aa5.27□□□□□ -1.57
SCL1YGL011C YER175W-AQ8TGU4 54 aa5.27□□□□□ -1.57
SCL1YGL011C SEC3P33332 1336 aaKnown RBP5.26□□□□□ -1.57
SCL1YGL011C RPL7AP05737 244 aaKnown RBP5.26□□□□□ -1.57
SCL1YGL011C RPA135P22138 1203 aaKnown RBP5.26□□□□□ -1.57
SCL1YGL011C ADY2P25613 283 aa5.26□□□□□ -1.57
SCL1YGL011C UGP1P32861 499 aaKnown RBP5.26□□□□□ -1.57
SCL1YGL011C BEM3P32873 1128 aa5.26□□□□□ -1.57
SCL1YGL011C LNP1P38878 278 aa5.26□□□□□ -1.57
SCL1YGL011C PSF2P40359 213 aa5.26□□□□□ -1.57
SCL1YGL011C YFL015CP43578 164 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms