RNA–Protein interactions for RNA: YBR149W

ARA1, Transcript of NADP+ dependent arabinose dehydrogenase, yeast

Gene ARA1, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARA1	YBR149W	TRS23	Q03784	219 aa		4.64	□□□□□ -1.67
ARA1	YBR149W	YDR179W-A	Q03983	463 aa		4.64	□□□□□ -1.67
ARA1	YBR149W	CIA1	Q05583	330 aa		4.64	□□□□□ -1.67
ARA1	YBR149W	CRD1	Q07560	283 aa		4.64	□□□□□ -1.67
ARA1	YBR149W	PHO5	P00635	467 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	PHO81	P17442	1178 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	CDC43	P18898	376 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	SIR1	P21691	654 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	MCM3	P24279	971 aa	Known RBP	4.63	□□□□□ -1.67
ARA1	YBR149W	EMP70	P32802	667 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	TDP1	P38319	544 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	VFA1	P40080	203 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	VPS73	P53142	486 aa	Known RBP	4.63	□□□□□ -1.67
ARA1	YBR149W	NGL2	Q03264	515 aa	Known RBP	4.63	□□□□□ -1.67
ARA1	YBR149W	YAP7	Q08182	245 aa		4.63	□□□□□ -1.67
ARA1	YBR149W	DMC1	P25453	334 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	PRE2	P30656	287 aa	Known RBP	4.62	□□□□□ -1.67
ARA1	YBR149W	DBF20	P32328	564 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	RIX1	P38883	763 aa	Predicted RBP	4.62	□□□□□ -1.67
ARA1	YBR149W	VPS27	P40343	622 aa	Known RBP	4.62	□□□□□ -1.67
ARA1	YBR149W	YGR021W	P53212	290 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	IMO32	P53219	342 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	CPR6	P53691	371 aa	Known RBP	4.62	□□□□□ -1.67
ARA1	YBR149W	VMS1	Q04311	632 aa	Known RBP	4.62	□□□□□ -1.67
ARA1	YBR149W	YPL216W	Q08964	1102 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	ICT1	Q12385	394 aa		4.62	□□□□□ -1.67
ARA1	YBR149W	MSM1	P22438	575 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	VPS34	P22543	875 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	RPS7A	P26786	190 aa	Known RBP	4.61	□□□□□ -1.67
ARA1	YBR149W	CCL1	P37366	393 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	YPT10	P38146	199 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	ERR3	P42222	437 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	ICL2	Q12031	575 aa		4.61	□□□□□ -1.67
ARA1	YBR149W	GFA1	P14742	717 aa	Known RBP	4.6	□□□□□ -1.67
ARA1	YBR149W	POL3	P15436	1097 aa		4.6	□□□□□ -1.67
ARA1	YBR149W	BET2	P20133	325 aa		4.6	□□□□□ -1.67
ARA1	YBR149W	SWI4	P25302	1093 aa	Known RBP	4.6	□□□□□ -1.67
ARA1	YBR149W	PIH1	P38768	344 aa		4.6	□□□□□ -1.67
ARA1	YBR149W	IDS2	P46958	469 aa		4.6	□□□□□ -1.67
ARA1	YBR149W	COQ11	Q05892	277 aa		4.6	□□□□□ -1.67
ARA1	YBR149W	IWR1	Q07532	353 aa	Predicted RBP	4.6	□□□□□ -1.67
ARA1	YBR149W	MDM20	Q12387	796 aa	Known RBP	4.6	□□□□□ -1.67
ARA1	YBR149W	ADE3	P07245	946 aa	Known RBP	4.59	□□□□□ -1.67
ARA1	YBR149W	TUB1	P09733	447 aa	Known RBP	4.59	□□□□□ -1.67
ARA1	YBR149W	RIT1	P23796	513 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	PTH2	P34222	208 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	YBR138C	P38277	524 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	SDH8	P38345	138 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	MUP3	P38734	546 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	PUG1	P40100	303 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	ASN1	P49089	572 aa	Known RBP	4.59	□□□□□ -1.67
ARA1	YBR149W	SAP4	P53036	818 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	VPS64	Q03944	604 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	AIM6	Q07716	390 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	TGS1	Q12052	315 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	YNL162W-A	Q3E7A8	72 aa		4.59	□□□□□ -1.67
ARA1	YBR149W	CTT1	P06115	562 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	TPK2	P06245	380 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	STE12	P13574	688 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	NCP1	P16603	691 aa	Known RBP	4.58	□□□□□ -1.68
ARA1	YBR149W	TRX2	P22803	104 aa	Known RBP	4.58	□□□□□ -1.68
ARA1	YBR149W	CDC5	P32562	705 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	MRS6	P32864	603 aa	Known RBP	4.58	□□□□□ -1.68
ARA1	YBR149W	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
ARA1	YBR149W	YGL117W	P53133	265 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	CPR8	P53728	308 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	YDL073W	Q07454	984 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
ARA1	YBR149W	ZPS1	Q12512	249 aa		4.58	□□□□□ -1.68
ARA1	YBR149W	CPA2	P03965	1118 aa	Known RBP	4.57	□□□□□ -1.68
ARA1	YBR149W	MIS1	P09440	975 aa	Known RBP	4.57	□□□□□ -1.68
ARA1	YBR149W	YPK1	P12688	680 aa	Known RBP	4.57	□□□□□ -1.68
ARA1	YBR149W	YCR061W	P25639	631 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	LOT5	P34234	306 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	FLO10	P36170	1169 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	CAB2	P40506	365 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	SAP185	P40856	1058 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	COQ6	P53318	479 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	ARC35	P53731	342 aa	Known RBP	4.57	□□□□□ -1.68
ARA1	YBR149W	ESF2	P53743	316 aa	Known RBP	4.57	□□□□□ -1.68
ARA1	YBR149W	YNL092W	P53934	400 aa		4.57	□□□□□ -1.68
ARA1	YBR149W	LEU2	P04173	364 aa	Predicted RBP	4.56	□□□□□ -1.68
ARA1	YBR149W	WHI2	P12611	486 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	CLB4	P24871	460 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	EXO84	P38261	753 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	YEL020C	P39994	560 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	IMA1	P53051	589 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	BLS1	Q06071	122 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	PSR2	Q07949	397 aa		4.56	□□□□□ -1.68
ARA1	YBR149W	AAC1	P04710	309 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	BIK1	P11709	440 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	RNR3	P21672	869 aa	Known RBP	4.55	□□□□□ -1.68
ARA1	YBR149W	YCL049C	P25577	312 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	ARP2	P32381	391 aa	Known RBP	4.55	□□□□□ -1.68
ARA1	YBR149W	ARO9	P38840	513 aa	Predicted RBP	4.55	□□□□□ -1.68
ARA1	YBR149W	YIL166C	P40445	542 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	ARA2	Q04212	335 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	ARG7	Q04728	441 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	CRF1	Q04930	467 aa		4.55	□□□□□ -1.68
ARA1	YBR149W	SAT4	P25333	603 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms