RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 USP17L21D6R901 530 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 SPDYE6P0CI01 402 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 NEK4P51957 841 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 SBK1Q52WX2 424 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 MTMR14Q8NCE2 650 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 NEK1Q96PY6 1258 aa23.53■■□□□ 1.36
PHGDH-210ENST00000641115 WDHD1O75717 1129 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-210ENST00000641115 HMGB1P09429 215 aaKnown RBP23.52■■□□□ 1.36
PHGDH-210ENST00000641115 ZNF280AP59817 542 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-210ENST00000641115 PICALMQ13492 652 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 BLOC1S2Q6QNY1 142 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 STOX1Q6ZVD7 989 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 MICALL2Q8IY33 904 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 PRMT6Q96LA8 375 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-210ENST00000641115 NBPF3Q9H094 633 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 ZSWIM6Q9HCJ5 1215 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 MYOZ2Q9NPC6 264 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 TMOD2Q9NZR1 351 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 CYP46A1Q9Y6A2 500 aa23.52■■□□□ 1.36
PHGDH-210ENST00000641115 TRDNQ13061 729 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 TBC1D10CQ8IV04 446 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 TDRD3Q9H7E2 651 aaKnown RBP23.51■■□□□ 1.35
PHGDH-210ENST00000641115 ANAPC4Q9UJX5 808 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 MYO1BO43795 1136 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 CTDSPL2Q05D32 466 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 RUFY3Q7L099 469 aa23.51■■□□□ 1.35
PHGDH-210ENST00000641115 RALYLQ86SE5 291 aaKnown RBP23.51■■□□□ 1.35
PHGDH-210ENST00000641115 RNF41Q9H4P4 317 aaPredicted RBP23.51■■□□□ 1.35
PHGDH-210ENST00000641115 CNOT7Q9UIV1 285 aaKnown RBP23.51■■□□□ 1.35
PHGDH-210ENST00000641115 ZC3H4Q9UPT8 1303 aaKnown RBP23.5■■□□□ 1.35
PHGDH-210ENST00000641115 POLR3DP05423 398 aaPredicted RBP23.5■■□□□ 1.35
PHGDH-210ENST00000641115 SLC3A2P08195 630 aaKnown RBP23.5■■□□□ 1.35
PHGDH-210ENST00000641115 AKNAD1Q5T1N1 836 aa23.5■■□□□ 1.35
PHGDH-210ENST00000641115 NCOA7Q8NI08 942 aa23.5■■□□□ 1.35
PHGDH-210ENST00000641115 IDI2Q9BXS1 227 aa23.5■■□□□ 1.35
PHGDH-210ENST00000641115 SAP30BPQ9UHR5 308 aaKnown RBP23.5■■□□□ 1.35
PHGDH-210ENST00000641115 CYP2D7A0A087X1C5 515 aa23.49■■□□□ 1.35
PHGDH-210ENST00000641115 BECN1Q14457 450 aa23.49■■□□□ 1.35
PHGDH-210ENST00000641115 MFSD6Q6ZSS7 791 aa23.49■■□□□ 1.35
PHGDH-210ENST00000641115 STAG1Q8WVM7 1258 aa23.49■■□□□ 1.35
PHGDH-210ENST00000641115 DDX4Q9NQI0 724 aaKnown RBP23.49■■□□□ 1.35
PHGDH-210ENST00000641115 SHTN1A0MZ66 631 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 H7C1D1 291 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 C12orf60Q5U649 245 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 HSCBQ8IWL3 235 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 SNX21Q969T3 373 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 OSBPL5Q9H0X9 879 aaPredicted RBP23.48■■□□□ 1.35
PHGDH-210ENST00000641115 CNNM2Q9H8M5 875 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 NPM3O75607 178 aaKnown RBP23.48■■□□□ 1.35
PHGDH-210ENST00000641115 CYP2D6P10635 497 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 PCP11498 1178 aaKnown RBP23.48■■□□□ 1.35
PHGDH-210ENST00000641115 CPA1P15085 419 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 RPS6KB1P23443 525 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 CACNB3P54284 484 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 NFIAQ12857 509 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 SLC4A8Q2Y0W8 1093 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 ZBED3Q96IU2 234 aaPredicted RBP23.48■■□□□ 1.35
PHGDH-210ENST00000641115 KRT23Q9C075 422 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 GPRC5DQ9NZD1 345 aa23.48■■□□□ 1.35
PHGDH-210ENST00000641115 ROBO3Q96MS0 1386 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 WNT10BO00744 389 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-210ENST00000641115 SPDYE2Q495Y8 402 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 DPY19L2Q6NUT2 758 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 TOMM22Q9NS69 142 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 PDRG1Q9NUG6 133 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 ZNF70Q9UC06 446 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-210ENST00000641115 NEDD4P46934 1319 aa23.47■■□□□ 1.35
PHGDH-210ENST00000641115 CLRN2A0PK11 232 aa23.46■■□□□ 1.35
PHGDH-210ENST00000641115 RBM26Q5T8P6 1007 aaKnown RBP23.46■■□□□ 1.35
PHGDH-210ENST00000641115 DHX32Q7L7V1 743 aaKnown RBP23.46■■□□□ 1.35
PHGDH-210ENST00000641115 TTC6Q86TZ1 520 aa23.46■■□□□ 1.35
PHGDH-210ENST00000641115 STK11IPQ8N1F8 1099 aa23.46■■□□□ 1.35
PHGDH-210ENST00000641115 ENTPD3O75355 529 aa23.45■■□□□ 1.34
PHGDH-210ENST00000641115 LMOD1P29536 600 aaPredicted RBP23.45■■□□□ 1.34
PHGDH-210ENST00000641115 PDE4BQ07343 736 aa23.45■■□□□ 1.34
PHGDH-210ENST00000641115 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
PHGDH-210ENST00000641115 UTRNP46939 3433 aa23.45■■□□□ 1.34
PHGDH-210ENST00000641115 HLA-DOAP06340 250 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 MCM2P49736 904 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 TCP10Q12799 353 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 NBPF9Q3BBW0 867 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 SAMD7Q7Z3H4 446 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 TTC14Q96N46 770 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 IPO9Q96P70 1041 aaKnown RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 DHX36Q9H2U1 1008 aaKnown RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 FAM198AQ9UFP1 575 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 COL2A1P02458 1487 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 MYH8P13535 1937 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 DCAF8L1A6NGE4 600 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 B4E1Z4 1266 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 CD2BP2O95400 341 aaKnown RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 MCM5P33992 734 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 PLCD1P51178 756 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 TBC1D10BQ4KMP7 808 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 RRP12Q5JTH9 1297 aaKnown RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 MB21D2Q8IYB1 491 aaPredicted RBP23.44■■□□□ 1.34
PHGDH-210ENST00000641115 TBC1D2Q9BYX2 928 aa23.44■■□□□ 1.34
PHGDH-210ENST00000641115 VEZTQ9HBM0 779 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms