RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 EVX2Q03828 476 aa12.61□□□□□ -0.39
TARDBP-230ENST00000639083 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
TARDBP-230ENST00000639083 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
TARDBP-230ENST00000639083 CRNKL1Q9BZJ0 848 aaKnown RBP12.61□□□□□ -0.39
TARDBP-230ENST00000639083 DCP1AQ9NPI6 582 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-230ENST00000639083 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
TARDBP-230ENST00000639083 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
TARDBP-230ENST00000639083 ELP1O95163 1332 aa12.61□□□□□ -0.39
TARDBP-230ENST00000639083 C6orf229H3BNL8 230 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 MMP10P09238 476 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 WTAPQ15007 396 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 RBSNQ9H1K0 784 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 ERICH2A1L162 156 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 GOLGA8AA7E2F4 631 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 PRDM1O75626 825 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 SRGNP10124 158 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 CEBPZQ03701 1054 aaKnown RBP12.6□□□□□ -0.39
TARDBP-230ENST00000639083 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 ESR2Q92731 530 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 PHKBQ93100 1093 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
TARDBP-230ENST00000639083 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 IL1R1P14778 569 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 NTRK3Q16288 839 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 CCDC183Q5T5S1 534 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 ILDR1Q86SU0 546 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 SP8Q8IXZ3 490 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 CDKL5O76039 1030 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 CPLX2Q6PUV4 134 aaKnown RBP12.59□□□□□ -0.39
TARDBP-230ENST00000639083 OLFM4Q6UX06 510 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 AIFM3Q96NN9 605 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
TARDBP-230ENST00000639083 GOLGB1Q14789 3259 aaKnown RBP12.58□□□□□ -0.4
TARDBP-230ENST00000639083 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 CYP2D6P10635 497 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 PGBD1Q96JS3 809 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 MYH13Q9UKX3 1938 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 TNKSO95271 1327 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 FGRP09769 529 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 NPR1P16066 1061 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 LIG1P18858 919 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
TARDBP-230ENST00000639083 GSTO1P78417 241 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 SEC23AQ15436 765 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 POTEAQ6S8J7 498 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 SH3RF3Q8TEJ3 882 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-230ENST00000639083 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 ALG1Q9BT22 464 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
TARDBP-230ENST00000639083 UBE2Q2LH0YL09 131 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 ZSCAN10Q96SZ4 725 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 BAG3O95817 575 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 PDE6BP35913 854 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 USP5P45974 858 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 ENAHQ8N8S7 591 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 NUP133Q8WUM0 1156 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 ZNF396Q96N95 335 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 SLC26A6Q9BXS9 759 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 ARPP21Q9UBL0 812 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 MKRN1Q9UHC7 482 aaKnown RBP12.57□□□□□ -0.4
TARDBP-230ENST00000639083 RCOR1Q9UKL0 485 aa12.57□□□□□ -0.4
TARDBP-230ENST00000639083 CHD4Q14839 1912 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 IGSF3O75054 1194 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-230ENST00000639083 LDHCP07864 332 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
TARDBP-230ENST00000639083 ALDH1B1P30837 517 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 RTN1Q16799 776 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
TARDBP-230ENST00000639083 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 TSPY26PQ9H489 355 aa12.56□□□□□ -0.4
TARDBP-230ENST00000639083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
TARDBP-230ENST00000639083 IFNAR1P17181 557 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms