RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, human

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHML-205	ENST00000638160	PICALM	Q13492	652 aa		32.74	■■■□□ 2.83
CHML-205	ENST00000638160	DCTPP1	Q9H773	170 aa		32.74	■■■□□ 2.83
CHML-205	ENST00000638160	IDH1	O75874	414 aa	Known RBP	32.73	■■■□□ 2.83
CHML-205	ENST00000638160	SH3BP5L	Q7L8J4	393 aa		32.73	■■■□□ 2.83
CHML-205	ENST00000638160	ERO1B	Q86YB8	467 aa		32.73	■■■□□ 2.83
CHML-205	ENST00000638160	ZKSCAN4	Q969J2	545 aa	Predicted RBP	32.73	■■■□□ 2.83
CHML-205	ENST00000638160	BCL11A	Q9H165	835 aa		32.73	■■■□□ 2.83
CHML-205	ENST00000638160	SPDYE5	A6NIY4	337 aa		32.72	■■■□□ 2.83
CHML-205	ENST00000638160	MAP3K12	Q12852	859 aa		32.72	■■■□□ 2.83
CHML-205	ENST00000638160	TTF1	Q15361	905 aa	Predicted RBP	32.72	■■■□□ 2.83
CHML-205	ENST00000638160	TEX11	Q8IYF3	940 aa		32.72	■■■□□ 2.83
CHML-205	ENST00000638160	SNCAIP	Q9Y6H5	919 aa		32.72	■■■□□ 2.83
CHML-205	ENST00000638160	AK9	Q5TCS8	1911 aa		32.71	■■■□□ 2.83
CHML-205	ENST00000638160	DDTL	A6NHG4	134 aa	Predicted RBP	32.71	■■■□□ 2.83
CHML-205	ENST00000638160	MAP3K10	Q02779	954 aa		32.71	■■■□□ 2.83
CHML-205	ENST00000638160	IFNL1	Q8IU54	200 aa		32.71	■■■□□ 2.83
CHML-205	ENST00000638160	ANTXR1	Q9H6X2	564 aa		32.71	■■■□□ 2.83
CHML-205	ENST00000638160	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.71	■■■□□ 2.83
CHML-205	ENST00000638160	NDUFB9	Q9Y6M9	179 aa		32.71	■■■□□ 2.83
CHML-205	ENST00000638160	TESPA1	A2RU30	521 aa	Predicted RBP	32.7	■■■□□ 2.83
CHML-205	ENST00000638160	CYP7A1	P22680	504 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	OTUD7B	Q6GQQ9	843 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.7	■■■□□ 2.83
CHML-205	ENST00000638160	CNKSR2	Q8WXI2	1034 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	OTUD5	Q96G74	571 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	CFHR5	Q9BXR6	569 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	PCDHB15	Q9Y5E8	787 aa		32.7	■■■□□ 2.83
CHML-205	ENST00000638160	OTOF	Q9HC10	1997 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	INPP5B	P32019	993 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	GTF2A2	P52657	109 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	ADGRA1	Q86SQ6	560 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	MS4A4A	Q96JQ5	239 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	ATRNL1	Q5VV63	1379 aa		32.69	■■■□□ 2.82
CHML-205	ENST00000638160	TBC1D8	O95759	1140 aa		32.68	■■■□□ 2.82
CHML-205	ENST00000638160	CRBN	Q96SW2	442 aa		32.68	■■■□□ 2.82
CHML-205	ENST00000638160	ATP5J	P18859	108 aa		32.67	■■■□□ 2.82
CHML-205	ENST00000638160	NOL9	Q5SY16	702 aa	Known RBP	32.67	■■■□□ 2.82
CHML-205	ENST00000638160	CERS3	Q8IU89	383 aa		32.67	■■■□□ 2.82
CHML-205	ENST00000638160	MAGEB6	Q8N7X4	407 aa		32.67	■■■□□ 2.82
CHML-205	ENST00000638160	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.67	■■■□□ 2.82
CHML-205	ENST00000638160	IGF2BP3	O00425	579 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
CHML-205	ENST00000638160	SMARCA5	O60264	1052 aa	Predicted RBP	32.66	■■■□□ 2.82
CHML-205	ENST00000638160	TBC1D12	O60347	775 aa		32.66	■■■□□ 2.82
CHML-205	ENST00000638160	PPAT	Q06203	517 aa		32.66	■■■□□ 2.82
CHML-205	ENST00000638160	NOM1	Q5C9Z4	860 aa	Known RBP	32.66	■■■□□ 2.82
CHML-205	ENST00000638160	CASP8AP2	Q9UKL3	1982 aa		32.66	■■■□□ 2.82
CHML-205	ENST00000638160	PHF20L1	A8MW92	1017 aa		32.65	■■■□□ 2.82
CHML-205	ENST00000638160	PPIL2	Q13356	520 aa		32.65	■■■□□ 2.82
CHML-205	ENST00000638160	DNAJC2	Q99543	621 aa	Known RBP	32.65	■■■□□ 2.82
CHML-205	ENST00000638160	COL2A1	P02458	1487 aa	Predicted RBP	32.65	■■■□□ 2.82
CHML-205	ENST00000638160	MAST2	Q6P0Q8	1798 aa		32.65	■■■□□ 2.82
CHML-205	ENST00000638160	PTPN18	Q99952	460 aa		32.64	■■■□□ 2.82
CHML-205	ENST00000638160	DHX36	Q9H2U1	1008 aa	Known RBP	32.64	■■■□□ 2.82
CHML-205	ENST00000638160	GOLIM4	O00461	696 aa		32.63	■■■□□ 2.81
CHML-205	ENST00000638160	TGFBRAP1	Q8WUH2	860 aa		32.63	■■■□□ 2.81
CHML-205	ENST00000638160	BOLA2	Q9H3K6	86 aa		32.63	■■■□□ 2.81
CHML-205	ENST00000638160	CCL15-CCL14	A0A0B4J2E2	113 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	IRF6	O14896	467 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	CETP	P11597	493 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	SNAPC2	Q13487	334 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	AAMP	Q13685	434 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	CCL15	Q16663	113 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	BRI3BP	Q8WY22	251 aa		32.62	■■■□□ 2.81
CHML-205	ENST00000638160	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.62	■■■□□ 2.81
CHML-205	ENST00000638160	LAMB1	P07942	1786 aa		32.61	■■■□□ 2.81
CHML-205	ENST00000638160	GPR25	O00155	361 aa		32.61	■■■□□ 2.81
CHML-205	ENST00000638160	DYNLL1	P63167	89 aa	Known RBP	32.61	■■■□□ 2.81
CHML-205	ENST00000638160	SLC9C2	Q5TAH2	1124 aa		32.61	■■■□□ 2.81
CHML-205	ENST00000638160	HAUS7	Q99871	368 aa		32.61	■■■□□ 2.81
CHML-205	ENST00000638160	PI4KB	Q9UBF8	816 aa		32.61	■■■□□ 2.81
CHML-205	ENST00000638160	CTNND1	O60716	968 aa	Known RBP	32.6	■■■□□ 2.81
CHML-205	ENST00000638160	SCYL3	Q8IZE3	742 aa		32.6	■■■□□ 2.81
CHML-205	ENST00000638160	MIGA1	Q8NAN2	632 aa		32.6	■■■□□ 2.81
CHML-205	ENST00000638160	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.6	■■■□□ 2.81
CHML-205	ENST00000638160	PICK1	Q9NRD5	415 aa		32.6	■■■□□ 2.81
CHML-205	ENST00000638160	PAG1	Q9NWQ8	432 aa		32.6	■■■□□ 2.81
CHML-205	ENST00000638160	MAPKAPK5	Q8IW41	473 aa		32.59	■■■□□ 2.81
CHML-205	ENST00000638160	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.59	■■■□□ 2.81
CHML-205	ENST00000638160	R3HDML	Q9H3Y0	253 aa		32.59	■■■□□ 2.81
CHML-205	ENST00000638160	ECHDC1	Q9NTX5	307 aa		32.59	■■■□□ 2.81
CHML-205	ENST00000638160	DOCK2	Q92608	1830 aa		32.58	■■■□□ 2.81
CHML-205	ENST00000638160	FLT1	P17948	1338 aa		32.58	■■■□□ 2.81
CHML-205	ENST00000638160	PDE6A	P16499	860 aa		32.58	■■■□□ 2.81
CHML-205	ENST00000638160	HERC5	Q9UII4	1024 aa	Known RBP	32.58	■■■□□ 2.81
CHML-205	ENST00000638160	KCNH4	Q9UQ05	1017 aa		32.58	■■■□□ 2.81
CHML-205	ENST00000638160	GPATCH3	Q96I76	525 aa		32.57	■■■□□ 2.8
CHML-205	ENST00000638160	SLURP2	P0DP57	97 aa		32.56	■■■□□ 2.8
CHML-205	ENST00000638160	DGKZ	Q13574	1117 aa		32.56	■■■□□ 2.8
CHML-205	ENST00000638160	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.56	■■■□□ 2.8
CHML-205	ENST00000638160	EDC3	Q96F86	508 aa	Known RBP	32.56	■■■□□ 2.8
CHML-205	ENST00000638160	FKTN	O75072	461 aa		32.55	■■■□□ 2.8
CHML-205	ENST00000638160	PTPRA	P18433	802 aa		32.55	■■■□□ 2.8
CHML-205	ENST00000638160	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.55	■■■□□ 2.8
CHML-205	ENST00000638160	MCOLN1	Q9GZU1	580 aa		32.55	■■■□□ 2.8
CHML-205	ENST00000638160	ZCCHC17	Q9NP64	241 aa	Known RBP	32.55	■■■□□ 2.8
CHML-205	ENST00000638160	MAGEB6P1	A0A0J9YX57	407 aa		32.54	■■■□□ 2.8
CHML-205	ENST00000638160	CXCL11	O14625	94 aa		32.54	■■■□□ 2.8
CHML-205	ENST00000638160	USP5	P45974	858 aa		32.54	■■■□□ 2.8
CHML-205	ENST00000638160	CRHR2	Q13324	411 aa		32.54	■■■□□ 2.8
CHML-205	ENST00000638160	CTU1	Q7Z7A3	348 aa	Known RBP	32.54	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms