RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ANO1Q5XXA6 986 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 KRT40Q6A162 431 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 RAI14Q9P0K7 980 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 MAST2Q6P0Q8 1798 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 DLEC1Q9Y238 1755 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 MAGEB6P1A0A0J9YX57 407 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 SEMA3EO15041 775 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 PPARAQ07869 468 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 STX1AQ16623 288 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 VPS37DQ86XT2 251 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 CCDC144CPQ8IYA2 1237 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 SETDB2Q96T68 719 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 RIOK1Q9BRS2 568 aaKnown RBP21.5■■□□□ 1.03
CTSD-212ENST00000637815 MYL10Q9BUA6 226 aa21.5■■□□□ 1.03
CTSD-212ENST00000637815 ANO8Q9HCE9 1232 aaPredicted RBP21.5■■□□□ 1.03
CTSD-212ENST00000637815 PDS5AQ29RF7 1337 aaKnown RBP21.49■■□□□ 1.03
CTSD-212ENST00000637815 RCAN1P53805 252 aa21.49■■□□□ 1.03
CTSD-212ENST00000637815 SF3A1Q15459 793 aaKnown RBP21.49■■□□□ 1.03
CTSD-212ENST00000637815 SMIM5Q71RC9 77 aa21.49■■□□□ 1.03
CTSD-212ENST00000637815 FBXO33Q7Z6M2 555 aa21.49■■□□□ 1.03
CTSD-212ENST00000637815 SRP68Q9UHB9 627 aaKnown RBP21.49■■□□□ 1.03
CTSD-212ENST00000637815 DUOX1Q9NRD9 1551 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 FMNL1O95466 1100 aaPredicted RBP21.48■■□□□ 1.03
CTSD-212ENST00000637815 TPM3P06753 285 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 IFNAR1P17181 557 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
CTSD-212ENST00000637815 TMTC2Q8N394 836 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 LAMB1P07942 1786 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 GNPATO15228 680 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 U2AF2P26368 475 aaKnown RBP eCLIP21.48■■□□□ 1.03
CTSD-212ENST00000637815 WTAPQ15007 396 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 IQCB1Q15051 598 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 MPNDQ8N594 471 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
CTSD-212ENST00000637815 TTC12Q9H892 705 aaPredicted RBP21.48■■□□□ 1.03
CTSD-212ENST00000637815 KIAA1551Q9HCM1 1747 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 ZPR1O75312 459 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 NDUFA8P51970 172 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 TERF1P54274 439 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 SSRP1Q08945 709 aaKnown RBP21.47■■□□□ 1.03
CTSD-212ENST00000637815 SLC39A14Q15043 492 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 RRP12Q5JTH9 1297 aaKnown RBP21.47■■□□□ 1.03
CTSD-212ENST00000637815 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
CTSD-212ENST00000637815 SDR42E1Q8WUS8 393 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 PIBF1Q8WXW3 757 aa21.47■■□□□ 1.03
CTSD-212ENST00000637815 ZNF830Q96NB3 372 aaPredicted RBP21.47■■□□□ 1.03
CTSD-212ENST00000637815 A0A1B0GVL5 298 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 GOLGA6L6A8MZA4 724 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 AXDND1Q5T1B0 1012 aaPredicted RBP21.46■■□□□ 1.03
CTSD-212ENST00000637815 PLA2G4DQ86XP0 818 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 TNRC6CQ9HCJ0 1690 aaKnown RBP21.46■■□□□ 1.03
CTSD-212ENST00000637815 ERICH2A1L162 156 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 C11orf57Q6ZUT1 292 aaPredicted RBP21.46■■□□□ 1.03
CTSD-212ENST00000637815 ZNF384Q8TF68 577 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 WASF1Q92558 559 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
CTSD-212ENST00000637815 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
CTSD-212ENST00000637815 CMA1P23946 247 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 TRIM29Q14134 588 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 RTN1Q16799 776 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.45■■□□□ 1.02
CTSD-212ENST00000637815 SLC26A6Q9BXS9 759 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 ANO10Q9NW15 660 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 RTCBQ9Y3I0 505 aaKnown RBP21.45■■□□□ 1.02
CTSD-212ENST00000637815 ZBTB22O15209 634 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 ZKSCAN3Q9BRR0 538 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 USP21Q9UK80 565 aa21.45■■□□□ 1.02
CTSD-212ENST00000637815 PPP6R2O75170 966 aa21.44■■□□□ 1.02
CTSD-212ENST00000637815 ZNF75DP51815 510 aa21.44■■□□□ 1.02
CTSD-212ENST00000637815 ESR2Q92731 530 aa21.44■■□□□ 1.02
CTSD-212ENST00000637815 CCDC196A0A1B0GTZ2 297 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 TPM2P07951 284 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 KLRK1P26718 216 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 PTPAQ15257 358 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 SEC23AQ15436 765 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 SARM1Q6SZW1 724 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 NBPF11Q86T75 865 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 MAP3K14Q99558 947 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.43■■□□□ 1.02
CTSD-212ENST00000637815 KCNF1Q9H3M0 494 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 SPATA31A6Q5VVP1 1343 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 MINDY4BA8MYZ0 360 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 PCP11498 1178 aaKnown RBP21.43■■□□□ 1.02
CTSD-212ENST00000637815 AMIGO3Q86WK7 504 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 ZNF654Q8IZM8 581 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 SPC24Q8NBT2 197 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
CTSD-212ENST00000637815 NSUN4Q96CB9 384 aaKnown RBP21.43■■□□□ 1.02
CTSD-212ENST00000637815 SDF4Q9BRK5 362 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 UBAC1Q9BSL1 405 aa21.43■■□□□ 1.02
CTSD-212ENST00000637815 UBE2Q2LH0YL09 131 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 WDHD1O75717 1129 aaPredicted RBP21.42■■□□□ 1.02
CTSD-212ENST00000637815 FGRP09769 529 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 TM4SF1P30408 202 aa21.42■■□□□ 1.02
CTSD-212ENST00000637815 DYNLL1P63167 89 aaKnown RBP21.42■■□□□ 1.02
CTSD-212ENST00000637815 GNL2Q13823 731 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms