RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 ERC2O15083 957 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 C21orf2O43822 256 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 TAF5LO75529 589 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 KCNJ4P48050 445 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 VGLL2Q8N8G2 317 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 GRPEL1Q9HAV7 217 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 IRF6O14896 467 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 GPSM2P81274 684 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 POU5F1Q01860 360 aaKnown RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 PUM3Q15397 648 aaKnown RBP13.64□□□□□ -0.23
LINC00538-201ENST00000626109 NBPF9Q3BBW0 867 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 GPR108Q9NPR9 543 aa13.64□□□□□ -0.23
LINC00538-201ENST00000626109 CD2BP2O95400 341 aaKnown RBP13.63□□□□□ -0.23
LINC00538-201ENST00000626109 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
LINC00538-201ENST00000626109 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 TCEAL9Q9UHQ7 104 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 LEMD3Q9Y2U8 911 aa13.63□□□□□ -0.23
LINC00538-201ENST00000626109 ZNF609O15014 1411 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 ATP2B4P23634 1241 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 UBE4AQ14139 1066 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 RTKN2Q8IZC4 609 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 ZNF512BQ96KM6 892 aaPredicted RBP13.62□□□□□ -0.23
LINC00538-201ENST00000626109 PUF60Q9UHX1 559 aaKnown RBP13.62□□□□□ -0.23
LINC00538-201ENST00000626109 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 A0A1B0GUL6 1792 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 ZNF804BA4D1E1 1349 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 UFL1O94874 794 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
LINC00538-201ENST00000626109 SLC5A1P13866 664 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 AACSQ86V21 672 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 LPIN2Q92539 896 aa13.62□□□□□ -0.23
LINC00538-201ENST00000626109 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
LINC00538-201ENST00000626109 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
LINC00538-201ENST00000626109 C6orf229H3BNL8 230 aa13.61□□□□□ -0.23
LINC00538-201ENST00000626109 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
LINC00538-201ENST00000626109 MCM2P49736 904 aa13.61□□□□□ -0.23
LINC00538-201ENST00000626109 PDE1AP54750 535 aa13.61□□□□□ -0.23
LINC00538-201ENST00000626109 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
LINC00538-201ENST00000626109 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
LINC00538-201ENST00000626109 FEZ2Q9UHY8 353 aaPredicted RBP13.61□□□□□ -0.23
LINC00538-201ENST00000626109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
LINC00538-201ENST00000626109 PRC1O43663 620 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 FGFR2P21802 821 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 PSEN1P49768 467 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 ENOX2Q16206 610 aaKnown RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 FILIP1Q7Z7B0 1213 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 ZNF467Q7Z7K2 595 aaPredicted RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 SUPT20HQ8NEM7 779 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 TBC1D16Q8TBP0 767 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 EAF2Q96CJ1 260 aaPredicted RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 LTBP1Q14766 1721 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 SNAP23O00161 211 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 KLHL40Q2TBA0 621 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 MAP9Q49MG5 647 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 MKL1Q969V6 931 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
LINC00538-201ENST00000626109 EYA3Q99504 573 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 ARFGEF1Q9Y6D6 1849 aa13.6□□□□□ -0.23
LINC00538-201ENST00000626109 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
LINC00538-201ENST00000626109 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
LINC00538-201ENST00000626109 TIMM10P62072 90 aa13.59□□□□□ -0.23
LINC00538-201ENST00000626109 REPIN1Q9BWE0 567 aaKnown RBP13.59□□□□□ -0.23
LINC00538-201ENST00000626109 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
LINC00538-201ENST00000626109 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
LINC00538-201ENST00000626109 DDX56Q9NY93 547 aaKnown RBP13.59□□□□□ -0.23
LINC00538-201ENST00000626109 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
LINC00538-201ENST00000626109 MKRN1Q9UHC7 482 aaKnown RBP13.59□□□□□ -0.23
LINC00538-201ENST00000626109 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
LINC00538-201ENST00000626109 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 XAGE2Q96GT9 111 aa13.58□□□□□ -0.23
LINC00538-201ENST00000626109 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 MRPL42Q9Y6G3 142 aaKnown RBP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 DDX49Q9Y6V7 483 aaKnown RBP13.58□□□□□ -0.23
LINC00538-201ENST00000626109 MED23Q9ULK4 1368 aa13.58□□□□□ -0.24
LINC00538-201ENST00000626109 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.24
LINC00538-201ENST00000626109 CAVIN4Q5BKX8 364 aa13.58□□□□□ -0.24
LINC00538-201ENST00000626109 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
LINC00538-201ENST00000626109 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
LINC00538-201ENST00000626109 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1009.2 ms