RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ATRNL1Q5VV63 1379 aa27.27■■□□□ 1.96
SF1-220ENST00000626028 TESPA1A2RU30 521 aaPredicted RBP27.27■■□□□ 1.96
SF1-220ENST00000626028 PPP4CP60510 307 aa27.27■■□□□ 1.96
SF1-220ENST00000626028 MKRN3Q13064 507 aaKnown RBP27.27■■□□□ 1.96
SF1-220ENST00000626028 OTUD7BQ6GQQ9 843 aa27.27■■□□□ 1.96
SF1-220ENST00000626028 YTHDC1Q96MU7 727 aaKnown RBP27.27■■□□□ 1.96
SF1-220ENST00000626028 ELP3Q9H9T3 547 aa27.27■■□□□ 1.96
SF1-220ENST00000626028 SPDYE5A6NIY4 337 aa27.26■■□□□ 1.95
SF1-220ENST00000626028 MAP3K10Q02779 954 aa27.26■■□□□ 1.95
SF1-220ENST00000626028 TTF1Q15361 905 aaPredicted RBP27.26■■□□□ 1.95
SF1-220ENST00000626028 ERO1BQ86YB8 467 aa27.26■■□□□ 1.95
SF1-220ENST00000626028 IFNL1Q8IU54 200 aa27.25■■□□□ 1.95
SF1-220ENST00000626028 LRRCC1Q9C099 1032 aa27.25■■□□□ 1.95
SF1-220ENST00000626028 MYH7P12883 1935 aa27.24■■□□□ 1.95
SF1-220ENST00000626028 GJA5P36382 358 aa27.24■■□□□ 1.95
SF1-220ENST00000626028 GTF2A2P52657 109 aa27.24■■□□□ 1.95
SF1-220ENST00000626028 MIGA2Q7L4E1 593 aa27.24■■□□□ 1.95
SF1-220ENST00000626028 SNCAIPQ9Y6H5 919 aa27.24■■□□□ 1.95
SF1-220ENST00000626028 DOCK1Q14185 1865 aa27.23■■□□□ 1.95
SF1-220ENST00000626028 APBB1O00213 710 aa27.23■■□□□ 1.95
SF1-220ENST00000626028 MAP3K12Q12852 859 aa27.23■■□□□ 1.95
SF1-220ENST00000626028 NOL9Q5SY16 702 aaKnown RBP27.23■■□□□ 1.95
SF1-220ENST00000626028 ZSCAN29Q8IWY8 852 aaPredicted RBP27.23■■□□□ 1.95
SF1-220ENST00000626028 ZFPM1Q8IX07 1006 aa27.23■■□□□ 1.95
SF1-220ENST00000626028 DCTPP1Q9H773 170 aa27.23■■□□□ 1.95
SF1-220ENST00000626028 DDX4Q9NQI0 724 aaKnown RBP27.23■■□□□ 1.95
SF1-220ENST00000626028 PIH1D3Q9NQM4 214 aaKnown RBP27.23■■□□□ 1.95
SF1-220ENST00000626028 TBC1D12O60347 775 aa27.22■■□□□ 1.95
SF1-220ENST00000626028 PPATQ06203 517 aa27.22■■□□□ 1.95
SF1-220ENST00000626028 ZKSCAN4Q969J2 545 aaPredicted RBP27.22■■□□□ 1.95
SF1-220ENST00000626028 MS4A4AQ96JQ5 239 aa27.22■■□□□ 1.95
SF1-220ENST00000626028 MYH1P12882 1939 aa27.22■■□□□ 1.95
SF1-220ENST00000626028 PPIL2Q13356 520 aa27.21■■□□□ 1.95
SF1-220ENST00000626028 PICALMQ13492 652 aa27.21■■□□□ 1.95
SF1-220ENST00000626028 AAMPQ13685 434 aa27.21■■□□□ 1.95
SF1-220ENST00000626028 SH3BP5LQ7L8J4 393 aa27.21■■□□□ 1.95
SF1-220ENST00000626028 TEX11Q8IYF3 940 aa27.21■■□□□ 1.95
SF1-220ENST00000626028 IDH1O75874 414 aaKnown RBP27.2■■□□□ 1.94
SF1-220ENST00000626028 OTUD5Q96G74 571 aa27.2■■□□□ 1.94
SF1-220ENST00000626028 OSBPL5Q9H0X9 879 aaPredicted RBP27.2■■□□□ 1.94
SF1-220ENST00000626028 DHX36Q9H2U1 1008 aaKnown RBP27.2■■□□□ 1.94
SF1-220ENST00000626028 ATAD5Q96QE3 1844 aa27.2■■□□□ 1.94
SF1-220ENST00000626028 DDTLA6NHG4 134 aaPredicted RBP27.19■■□□□ 1.94
SF1-220ENST00000626028 ZCCHC17Q9NP64 241 aaKnown RBP27.19■■□□□ 1.94
SF1-220ENST00000626028 AATFQ9NY61 560 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■■□□□ 13.7
SF1-220ENST00000626028 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.19■■□□□ 1.94
SF1-220ENST00000626028 PHF20L1A8MW92 1017 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 IGF2BP3O00425 579 aaKnown RBP eCLIP27.18■■□□□ 1.94
SF1-220ENST00000626028 TBC1D8O95759 1140 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 CETPP11597 493 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 ATP5JP18859 108 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 CYP7A1P22680 504 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 INPP5BP32019 993 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 SNAPC2Q13487 334 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 SH3RF3Q8TEJ3 882 aaPredicted RBP27.18■■□□□ 1.94
SF1-220ENST00000626028 PHIPQ8WWQ0 1821 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 PTPRFP10586 1907 aa27.18■■□□□ 1.94
SF1-220ENST00000626028 ADGRA1Q86SQ6 560 aa27.17■■□□□ 1.94
SF1-220ENST00000626028 CNKSR2Q8WXI2 1034 aa27.17■■□□□ 1.94
SF1-220ENST00000626028 ANTXR1Q9H6X2 564 aa27.17■■□□□ 1.94
SF1-220ENST00000626028 GPR25O00155 361 aa27.16■■□□□ 1.94
SF1-220ENST00000626028 CTNND1O60716 968 aaKnown RBP27.16■■□□□ 1.94
SF1-220ENST00000626028 MAGEB6Q8N7X4 407 aa27.16■■□□□ 1.94
SF1-220ENST00000626028 HERC5Q9UII4 1024 aaKnown RBP27.16■■□□□ 1.94
SF1-220ENST00000626028 SIPA1L1O43166 1804 aa27.16■■□□□ 1.94
SF1-220ENST00000626028 CCL15-CCL14A0A0B4J2E2 113 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 IRF6O14896 467 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 CCL15Q16663 113 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 SCYL3Q8IZE3 742 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 PTPN18Q99952 460 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 PI4KBQ9UBF8 816 aa27.15■■□□□ 1.94
SF1-220ENST00000626028 BRI3BPQ8WY22 251 aa27.14■■□□□ 1.94
SF1-220ENST00000626028 KCNH4Q9UQ05 1017 aa27.14■■□□□ 1.94
SF1-220ENST00000626028 PCDHB15Q9Y5E8 787 aa27.14■■□□□ 1.94
SF1-220ENST00000626028 NDUFB9Q9Y6M9 179 aa27.14■■□□□ 1.94
SF1-220ENST00000626028 ZNF296Q8WUU4 475 aaPredicted RBP27.13■■□□□ 1.93
SF1-220ENST00000626028 HAUS7Q99871 368 aa27.13■■□□□ 1.93
SF1-220ENST00000626028 PICK1Q9NRD5 415 aa27.13■■□□□ 1.93
SF1-220ENST00000626028 FLT1P17948 1338 aa27.13■■□□□ 1.93
SF1-220ENST00000626028 CXCL11O14625 94 aa27.12■■□□□ 1.93
SF1-220ENST00000626028 FKTNO75072 461 aa27.12■■□□□ 1.93
SF1-220ENST00000626028 PKN2Q16513 984 aaKnown RBP27.12■■□□□ 1.93
SF1-220ENST00000626028 CTU1Q7Z7A3 348 aaKnown RBP27.12■■□□□ 1.93
SF1-220ENST00000626028 TGFBRAP1Q8WUH2 860 aa27.12■■□□□ 1.93
SF1-220ENST00000626028 GPATCH3Q96I76 525 aa27.12■■□□□ 1.93
SF1-220ENST00000626028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.12■■□□□ 1.93
SF1-220ENST00000626028 PAG1Q9NWQ8 432 aa27.12■■□□□ 1.93
SF1-220ENST00000626028 GOLIM4O00461 696 aa27.11■■□□□ 1.93
SF1-220ENST00000626028 DGKZQ13574 1117 aa27.11■■□□□ 1.93
SF1-220ENST00000626028 SLC9C2Q5TAH2 1124 aa27.11■■□□□ 1.93
SF1-220ENST00000626028 METTL16Q86W50 562 aaKnown RBP27.11■■□□□ 1.93
SF1-220ENST00000626028 FOXP4Q8IVH2 680 aaPredicted RBP27.11■■□□□ 1.93
SF1-220ENST00000626028 ABHD8Q96I13 439 aa27.11■■□□□ 1.93
SF1-220ENST00000626028 DNAJC2Q99543 621 aaKnown RBP27.11■■□□□ 1.93
SF1-220ENST00000626028 TBC1D2Q9BYX2 928 aa27.11■■□□□ 1.93
SF1-220ENST00000626028 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.11■■□□□ 1.93
SF1-220ENST00000626028 PDE6AP16499 860 aa27.1■■□□□ 1.93
SF1-220ENST00000626028 CRBNQ96SW2 442 aa27.1■■□□□ 1.93
SF1-220ENST00000626028 MCOLN1Q9GZU1 580 aa27.1■■□□□ 1.93
SF1-220ENST00000626028 ECHDC1Q9NTX5 307 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms