RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
SSBP4-215ENST00000625926 SNRKQ9NRH2 765 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
SSBP4-215ENST00000625926 IGSF3O75054 1194 aa13.28□□□□□ -0.28
SSBP4-215ENST00000625926 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
SSBP4-215ENST00000625926 RHBDL3P58872 404 aa13.28□□□□□ -0.28
SSBP4-215ENST00000625926 NOL10Q9BSC4 688 aaKnown RBP13.28□□□□□ -0.28
SSBP4-215ENST00000625926 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
SSBP4-215ENST00000625926 ZFYVE28Q9HCC9 887 aa13.28□□□□□ -0.28
SSBP4-215ENST00000625926 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
SSBP4-215ENST00000625926 DBNLQ9UJU6 430 aaKnown RBP13.28□□□□□ -0.28
SSBP4-215ENST00000625926 EXOC6BQ9Y2D4 811 aa13.28□□□□□ -0.28
SSBP4-215ENST00000625926 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 BAG3O95817 575 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 CYP2E1P05181 493 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 MAP3K10Q02779 954 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 TAF1CQ15572 869 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 NAA16Q6N069 864 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.29
SSBP4-215ENST00000625926 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 ERO1AQ96HE7 468 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 ZBTB40Q9NUA8 1239 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.29
SSBP4-215ENST00000625926 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 HMMRO75330 724 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 ZAP70P43403 619 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 SP3Q02447 781 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 AACSQ86V21 672 aa13.26□□□□□ -0.29
SSBP4-215ENST00000625926 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
SSBP4-215ENST00000625926 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
SSBP4-215ENST00000625926 TLR7Q9NYK1 1049 aaKnown RBP13.26□□□□□ -0.29
SSBP4-215ENST00000625926 ATRNL1Q5VV63 1379 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 BTBD19C9JJ37 291 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 CTNND1O60716 968 aaKnown RBP13.25□□□□□ -0.29
SSBP4-215ENST00000625926 PLCG2P16885 1265 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 PPP4CP60510 307 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 SCYL3Q8IZE3 742 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 RHPN1Q8TCX5 695 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 KCNH4Q9UQ05 1017 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 TRIM17Q9Y577 477 aa13.25□□□□□ -0.29
SSBP4-215ENST00000625926 CXCL11O14625 94 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 TBC1D12O60347 775 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 ANKRD23Q86SG2 305 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 CD99L2Q8TCZ2 262 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 SH3RF3Q8TEJ3 882 aaPredicted RBP13.24□□□□□ -0.29
SSBP4-215ENST00000625926 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 OSBPL5Q9H0X9 879 aaPredicted RBP13.24□□□□□ -0.29
SSBP4-215ENST00000625926 IL1RAPL2Q9NP60 686 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 PIH1D3Q9NQM4 214 aaKnown RBP13.24□□□□□ -0.29
SSBP4-215ENST00000625926 AATFQ9NY61 560 aaKnown RBP eCLIP13.24□□□□□ -0.29
SSBP4-215ENST00000625926 ZHX2Q9Y6X8 837 aa13.24□□□□□ -0.29
SSBP4-215ENST00000625926 TLR2O60603 784 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 RAB11FIP3O75154 756 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 PTPRAP18433 802 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 SIRT2Q8IXJ6 389 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
SSBP4-215ENST00000625926 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
SSBP4-215ENST00000625926 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
SSBP4-215ENST00000625926 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
SSBP4-215ENST00000625926 APBB1O00213 710 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 PDHXO00330 501 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
SSBP4-215ENST00000625926 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 SOX10P56693 466 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
SSBP4-215ENST00000625926 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
SSBP4-215ENST00000625926 IFIT2P09913 472 aaKnown RBP13.21□□□□□ -0.29
SSBP4-215ENST00000625926 CYP7A1P22680 504 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 MAP3K12Q12852 859 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 MOGSQ13724 837 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 KIF22Q14807 665 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 TMED8Q6PL24 325 aaPredicted RBP13.21□□□□□ -0.29
SSBP4-215ENST00000625926 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
SSBP4-215ENST00000625926 CERS3Q8IU89 383 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
SSBP4-215ENST00000625926 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
SSBP4-215ENST00000625926 A0A0G2JLL6 359 aaPredicted RBP13.2□□□□□ -0.3
SSBP4-215ENST00000625926 FAM196BA6NMK8 535 aa13.2□□□□□ -0.3
SSBP4-215ENST00000625926 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
SSBP4-215ENST00000625926 C17orf99Q6UX52 265 aa13.2□□□□□ -0.3
SSBP4-215ENST00000625926 PRRT2Q7Z6L0 340 aaPredicted RBP13.2□□□□□ -0.3
SSBP4-215ENST00000625926 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
SSBP4-215ENST00000625926 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
SSBP4-215ENST00000625926 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
SSBP4-215ENST00000625926 ANTXR1Q9H6X2 564 aa13.2□□□□□ -0.3
SSBP4-215ENST00000625926 NDUFB9Q9Y6M9 179 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms