RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 ARHGAP39Q9C0H5 1083 aa23.63■■□□□ 1.37
ATG4B-226ENST00000625810 PTCH2Q9Y6C5 1203 aa23.63■■□□□ 1.37
ATG4B-226ENST00000625810 DOCK2Q92608 1830 aa23.63■■□□□ 1.37
ATG4B-226ENST00000625810 LDHCP07864 332 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 UQCRFS1P1P0C7P4 283 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 GSTO1P78417 241 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 LACTBP83111 547 aaPredicted RBP23.62■■□□□ 1.37
ATG4B-226ENST00000625810 ATP8B2P98198 1209 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 PICALMQ13492 652 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 PI16Q6UXB8 463 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 TBC1D9Q6ZT07 1266 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 ZNF333Q96JL9 665 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 RAI14Q9P0K7 980 aa23.62■■□□□ 1.37
ATG4B-226ENST00000625810 MKI67P46013 3256 aaKnown RBP23.61■■□□□ 1.37
ATG4B-226ENST00000625810 ARID4AP29374 1257 aaPredicted RBP23.61■■□□□ 1.37
ATG4B-226ENST00000625810 MOGSQ13724 837 aa23.61■■□□□ 1.37
ATG4B-226ENST00000625810 POLA2Q14181 598 aa23.61■■□□□ 1.37
ATG4B-226ENST00000625810 SH3BP5LQ7L8J4 393 aa23.61■■□□□ 1.37
ATG4B-226ENST00000625810 ANKRD23Q86SG2 305 aa23.61■■□□□ 1.37
ATG4B-226ENST00000625810 C1orf115Q9H7X2 142 aa23.61■■□□□ 1.37
ATG4B-226ENST00000625810 KIAA0100Q14667 2235 aaKnown RBP23.6■■□□□ 1.37
ATG4B-226ENST00000625810 GPR75-ASB3A0A0A6YYF3 556 aa23.6■■□□□ 1.37
ATG4B-226ENST00000625810 PHF20L1A8MW92 1017 aa23.6■■□□□ 1.37
ATG4B-226ENST00000625810 SURF6O75683 361 aaKnown RBP23.6■■□□□ 1.37
ATG4B-226ENST00000625810 KIF22Q14807 665 aa23.6■■□□□ 1.37
ATG4B-226ENST00000625810 SSH3Q8TE77 659 aa23.6■■□□□ 1.37
ATG4B-226ENST00000625810 ADGRA2Q96PE1 1338 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 PDHXO00330 501 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 SLC9C1Q4G0N8 1177 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 CCDC158Q5M9N0 1113 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 TTC39AQ5SRH9 613 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 C17orf99Q6UX52 265 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 ZNF384Q8TF68 577 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 GPR108Q9NPR9 543 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 DDX4Q9NQI0 724 aaKnown RBP23.59■■□□□ 1.37
ATG4B-226ENST00000625810 PICK1Q9NRD5 415 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 LRP2BPQ9P2M1 347 aa23.59■■□□□ 1.37
ATG4B-226ENST00000625810 DDTLA6NHG4 134 aaPredicted RBP23.58■■□□□ 1.37
ATG4B-226ENST00000625810 EN2P19622 333 aaPredicted RBP23.58■■□□□ 1.37
ATG4B-226ENST00000625810 MCAMP43121 646 aa23.58■■□□□ 1.37
ATG4B-226ENST00000625810 TNNI3KQ59H18 835 aa23.58■■□□□ 1.37
ATG4B-226ENST00000625810 NSUN4Q96CB9 384 aaKnown RBP23.58■■□□□ 1.37
ATG4B-226ENST00000625810 CPA4Q9UI42 421 aa23.58■■□□□ 1.37
ATG4B-226ENST00000625810 FPGT-TNNI3KV9GXZ4 949 aa23.58■■□□□ 1.37
ATG4B-226ENST00000625810 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
ATG4B-226ENST00000625810 RLBP1P12271 317 aa23.57■■□□□ 1.36
ATG4B-226ENST00000625810 RHBDL3P58872 404 aa23.57■■□□□ 1.36
ATG4B-226ENST00000625810 MAP3K10Q02779 954 aa23.57■■□□□ 1.36
ATG4B-226ENST00000625810 SCYL3Q8IZE3 742 aa23.57■■□□□ 1.36
ATG4B-226ENST00000625810 ZBED9Q6R2W3 1325 aa23.57■■□□□ 1.36
ATG4B-226ENST00000625810 CXCL11O14625 94 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 SLURP2P0DP57 97 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 CTGFP29279 349 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 NBPF11Q86T75 865 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 DBNDD2Q9BQY9 259 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
ATG4B-226ENST00000625810 SNRKQ9NRH2 765 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 ZHX2Q9Y6X8 837 aa23.56■■□□□ 1.36
ATG4B-226ENST00000625810 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
ATG4B-226ENST00000625810 GNRH1P01148 92 aa23.55■■□□□ 1.36
ATG4B-226ENST00000625810 GPAT2Q6NUI2 795 aa23.55■■□□□ 1.36
ATG4B-226ENST00000625810 TMEM106CQ9BVX2 250 aa23.55■■□□□ 1.36
ATG4B-226ENST00000625810 NPM3O75607 178 aaKnown RBP23.54■■□□□ 1.36
ATG4B-226ENST00000625810 PTPRAP18433 802 aa23.54■■□□□ 1.36
ATG4B-226ENST00000625810 SH3TC2Q8TF17 1288 aa23.54■■□□□ 1.36
ATG4B-226ENST00000625810 CTNND1O60716 968 aaKnown RBP23.53■■□□□ 1.36
ATG4B-226ENST00000625810 ECM2O94769 699 aaPredicted RBP23.53■■□□□ 1.36
ATG4B-226ENST00000625810 TEX11Q8IYF3 940 aa23.53■■□□□ 1.36
ATG4B-226ENST00000625810 TRIM47Q96LD4 638 aa23.53■■□□□ 1.36
ATG4B-226ENST00000625810 NOP58Q9Y2X3 529 aaKnown RBP23.53■■□□□ 1.36
ATG4B-226ENST00000625810 DOCK1Q14185 1865 aa23.53■■□□□ 1.36
ATG4B-226ENST00000625810 A0A0G2JLL6 359 aaPredicted RBP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 PSMC4P43686 418 aa23.52■■□□□ 1.36
ATG4B-226ENST00000625810 PRMT2P55345 433 aa23.52■■□□□ 1.36
ATG4B-226ENST00000625810 NAA16Q6N069 864 aaPredicted RBP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 FASTKD5Q7L8L6 764 aaKnown RBP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 PRRT2Q7Z6L0 340 aaPredicted RBP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 PARK7Q99497 189 aaKnown RBP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.52■■□□□ 1.36
ATG4B-226ENST00000625810 AFG3L2Q9Y4W6 797 aa23.52■■□□□ 1.36
ATG4B-226ENST00000625810 TBC1D12O60347 775 aa23.51■■□□□ 1.35
ATG4B-226ENST00000625810 BAG3O95817 575 aa23.51■■□□□ 1.35
ATG4B-226ENST00000625810 MYCP01106 439 aaPredicted RBP23.51■■□□□ 1.35
ATG4B-226ENST00000625810 CYP2C8P10632 490 aa23.51■■□□□ 1.35
ATG4B-226ENST00000625810 GADL1Q6ZQY3 521 aa23.51■■□□□ 1.35
ATG4B-226ENST00000625810 SRRDQ9UH36 339 aa23.51■■□□□ 1.35
ATG4B-226ENST00000625810 PHIPQ8WWQ0 1821 aa23.5■■□□□ 1.35
ATG4B-226ENST00000625810 BCRP11274 1271 aa23.5■■□□□ 1.35
ATG4B-226ENST00000625810 SLC4A8Q2Y0W8 1093 aa23.5■■□□□ 1.35
ATG4B-226ENST00000625810 PANK1Q8TE04 598 aa23.5■■□□□ 1.35
ATG4B-226ENST00000625810 CCDC8Q9H0W5 538 aaPredicted RBP23.5■■□□□ 1.35
ATG4B-226ENST00000625810 OSBPL5Q9H0X9 879 aaPredicted RBP23.5■■□□□ 1.35
ATG4B-226ENST00000625810 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.5■■□□□ 1.35
ATG4B-226ENST00000625810 COL2A1P02458 1487 aaPredicted RBP23.49■■□□□ 1.35
ATG4B-226ENST00000625810 FAM196BA6NMK8 535 aa23.49■■□□□ 1.35
ATG4B-226ENST00000625810 MS4A1P11836 297 aa23.49■■□□□ 1.35
ATG4B-226ENST00000625810 OSBPP22059 807 aa23.49■■□□□ 1.35
ATG4B-226ENST00000625810 CEP85Q6P2H3 762 aa23.49■■□□□ 1.35
ATG4B-226ENST00000625810 SH3RF3Q8TEJ3 882 aaPredicted RBP23.49■■□□□ 1.35
ATG4B-226ENST00000625810 ZNF512BQ96KM6 892 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms