RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 DDX11Q96FC9 970 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 LY9Q9HBG7 655 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 HPS5Q9UPZ3 1129 aa19.11■□□□□ 0.65
LDB3-208ENST00000623007 TCHHQ07283 1943 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 QSER1Q2KHR3 1735 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 GOLGA6L4A6NEF3 574 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 FIBPO43427 364 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 PRKAB2O43741 272 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 RESTQ13127 1097 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 CCDC178Q5BJE1 867 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 CCDC183Q5T5S1 534 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 BRAPQ7Z569 592 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 CD209Q9NNX6 404 aa19.1■□□□□ 0.65
LDB3-208ENST00000623007 ORC4O43929 436 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 CALM1P0DP23 149 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 CALM2P0DP24 149 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 CALM3P0DP25 149 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 CTDSPL2Q05D32 466 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 PDE4BQ07343 736 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 MASTLQ96GX5 879 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 C8orf76Q96K31 380 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 SPATA32Q96LK8 384 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 COA1Q9GZY4 146 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 ZNF287Q9HBT7 754 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 TOMM22Q9NS69 142 aa19.09■□□□□ 0.65
LDB3-208ENST00000623007 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
LDB3-208ENST00000623007 SRGNP10124 158 aa19.08■□□□□ 0.65
LDB3-208ENST00000623007 LRSAM1Q6UWE0 723 aa19.08■□□□□ 0.65
LDB3-208ENST00000623007 TBC1D16Q8TBP0 767 aa19.08■□□□□ 0.65
LDB3-208ENST00000623007 LAMB1P07942 1786 aa19.08■□□□□ 0.65
LDB3-208ENST00000623007 LTBP1Q14766 1721 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 MINDY4BA8MYZ0 360 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 PRDX5P30044 214 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 TXNRD3Q86VQ6 643 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 SDR42E1Q8WUS8 393 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 FAM163AQ96GL9 167 aaPredicted RBP19.08■□□□□ 0.64
LDB3-208ENST00000623007 EYA3Q99504 573 aa19.08■□□□□ 0.64
LDB3-208ENST00000623007 NCOA5Q9HCD5 579 aaKnown RBP19.08■□□□□ 0.64
LDB3-208ENST00000623007 FAM205AQ6ZU69 1335 aa19.07■□□□□ 0.64
LDB3-208ENST00000623007 ANKRD31Q8N7Z5 1873 aa19.07■□□□□ 0.64
LDB3-208ENST00000623007 WTIPA6NIX2 430 aaPredicted RBP19.07■□□□□ 0.64
LDB3-208ENST00000623007 GOLGA8AA7E2F4 631 aa19.07■□□□□ 0.64
LDB3-208ENST00000623007 TRIM22Q8IYM9 498 aa19.07■□□□□ 0.64
LDB3-208ENST00000623007 FBXO18Q8NFZ0 1043 aa19.07■□□□□ 0.64
LDB3-208ENST00000623007 DCP1AQ9NPI6 582 aaPredicted RBP19.07■□□□□ 0.64
LDB3-208ENST00000623007 TRIM29Q14134 588 aa19.06■□□□□ 0.64
LDB3-208ENST00000623007 FOXD4L6Q3SYB3 417 aaPredicted RBP19.06■□□□□ 0.64
LDB3-208ENST00000623007 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
LDB3-208ENST00000623007 CTR9Q6PD62 1173 aa19.06■□□□□ 0.64
LDB3-208ENST00000623007 FOXD4L3Q6VB84 417 aaPredicted RBP19.06■□□□□ 0.64
LDB3-208ENST00000623007 ZNF384Q8TF68 577 aa19.06■□□□□ 0.64
LDB3-208ENST00000623007 AATFQ9NY61 560 aaKnown RBP eCLIP19.06■□□□□ 0.64
LDB3-208ENST00000623007 TMEM63CQ9P1W3 806 aa19.06■□□□□ 0.64
LDB3-208ENST00000623007 IFNAR1P17181 557 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 IARSP41252 1262 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 FERMT3Q86UX7 667 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 GDPD2Q9HCC8 539 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 RBM28Q9NW13 759 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 STK32BQ9NY57 414 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 MYH15Q9Y2K3 1946 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 MROH7-TTC4A0A0A0MT08 1334 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 C6orf229H3BNL8 230 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 MMP10P09238 476 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 DYNLL1P63167 89 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 SSRP1Q08945 709 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 GRIPAP1Q4V328 841 aa19.05■□□□□ 0.64
LDB3-208ENST00000623007 ZC3H12CQ9C0D7 883 aaKnown RBP19.05■□□□□ 0.64
LDB3-208ENST00000623007 USP17L12C9JPN9 530 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 USP17L21D6R901 530 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 XRCC6P12956 609 aaKnown RBP eCLIP19.04■□□□□ 0.64
LDB3-208ENST00000623007 USP5P45974 858 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 RTN1Q16799 776 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 MICU3Q86XE3 530 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 MPNDQ8N594 471 aa19.04■□□□□ 0.64
LDB3-208ENST00000623007 LEO1Q8WVC0 666 aaPredicted RBP19.04■□□□□ 0.64
LDB3-208ENST00000623007 ZSCAN10Q96SZ4 725 aaPredicted RBP19.04■□□□□ 0.64
LDB3-208ENST00000623007 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
LDB3-208ENST00000623007 CATIPQ7Z7H3 387 aa19.03■□□□□ 0.64
LDB3-208ENST00000623007 GPHNQ9NQX3 736 aaPredicted RBP19.03■□□□□ 0.64
LDB3-208ENST00000623007 DDX19AQ9NUU7 478 aaKnown RBP19.03■□□□□ 0.64
LDB3-208ENST00000623007 ROBO3Q96MS0 1386 aa19.03■□□□□ 0.64
LDB3-208ENST00000623007 GADD45BO75293 160 aaPredicted RBP19.02■□□□□ 0.64
LDB3-208ENST00000623007 DDAH1O94760 285 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 TNKSO95271 1327 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 XBP1P17861 261 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 SLC15A2Q16348 729 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 POLLQ9UGP5 575 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 RCOR1Q9UKL0 485 aa19.02■□□□□ 0.64
LDB3-208ENST00000623007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.02■□□□□ 0.64
LDB3-208ENST00000623007 DLEC1Q9Y238 1755 aa19.02■□□□□ 0.63
LDB3-208ENST00000623007 GPR75-ASB3A0A0A6YYF3 556 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 H0YIN7 160 aa19.01■□□□□ 0.63
LDB3-208ENST00000623007 FMNL1O95466 1100 aaPredicted RBP19.01■□□□□ 0.63
LDB3-208ENST00000623007 SEC23AQ15436 765 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms