RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 SCYL3Q8IZE3 742 aa18.28■□□□□ 0.52
TMCO3-209ENST00000619336 PICK1Q9NRD5 415 aa18.28■□□□□ 0.52
TMCO3-209ENST00000619336 TAOK2Q9UL54 1235 aa18.28■□□□□ 0.52
TMCO3-209ENST00000619336 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
TMCO3-209ENST00000619336 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
TMCO3-209ENST00000619336 DOCK1Q14185 1865 aa18.27■□□□□ 0.52
TMCO3-209ENST00000619336 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
TMCO3-209ENST00000619336 TNPO2O14787 897 aaKnown RBP18.27■□□□□ 0.52
TMCO3-209ENST00000619336 FASTKD5Q7L8L6 764 aaKnown RBP18.27■□□□□ 0.52
TMCO3-209ENST00000619336 LPIN2Q92539 896 aa18.27■□□□□ 0.52
TMCO3-209ENST00000619336 PHIPQ8WWQ0 1821 aa18.27■□□□□ 0.52
TMCO3-209ENST00000619336 MYH2Q9UKX2 1941 aa18.27■□□□□ 0.51
TMCO3-209ENST00000619336 EYA2O00167 538 aa18.26■□□□□ 0.51
TMCO3-209ENST00000619336 LDHBP07195 334 aaKnown RBP18.26■□□□□ 0.51
TMCO3-209ENST00000619336 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
TMCO3-209ENST00000619336 PTPRAP18433 802 aa18.26■□□□□ 0.51
TMCO3-209ENST00000619336 PXYLP1Q8TE99 480 aa18.26■□□□□ 0.51
TMCO3-209ENST00000619336 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
TMCO3-209ENST00000619336 AFG3L2Q9Y4W6 797 aa18.26■□□□□ 0.51
TMCO3-209ENST00000619336 RGS3P49796 1198 aa18.25■□□□□ 0.51
TMCO3-209ENST00000619336 IRF5Q13568 498 aa18.25■□□□□ 0.51
TMCO3-209ENST00000619336 DIS3LQ8TF46 1054 aaKnown RBP18.25■□□□□ 0.51
TMCO3-209ENST00000619336 PAWRQ96IZ0 340 aaKnown RBP18.25■□□□□ 0.51
TMCO3-209ENST00000619336 PAK6Q9NQU5 681 aaPredicted RBP18.25■□□□□ 0.51
TMCO3-209ENST00000619336 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
TMCO3-209ENST00000619336 CUL9Q8IWT3 2517 aa18.25■□□□□ 0.51
TMCO3-209ENST00000619336 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
TMCO3-209ENST00000619336 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
TMCO3-209ENST00000619336 SH3BP5LQ7L8J4 393 aa18.24■□□□□ 0.51
TMCO3-209ENST00000619336 CCDC84Q86UT8 332 aaPredicted RBP18.24■□□□□ 0.51
TMCO3-209ENST00000619336 ZSCAN29Q8IWY8 852 aaPredicted RBP18.24■□□□□ 0.51
TMCO3-209ENST00000619336 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
TMCO3-209ENST00000619336 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
TMCO3-209ENST00000619336 SLC45A1Q9Y2W3 748 aa18.24■□□□□ 0.51
TMCO3-209ENST00000619336 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
TMCO3-209ENST00000619336 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
TMCO3-209ENST00000619336 ANKRD13CQ8N6S4 541 aa18.23■□□□□ 0.51
TMCO3-209ENST00000619336 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
TMCO3-209ENST00000619336 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 ENTPD3O75355 529 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 NECAB2Q7Z6G3 386 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 C7orf61Q8IZ16 206 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 COA7Q96BR5 231 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 IDI2Q9BXS1 227 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.22■□□□□ 0.51
TMCO3-209ENST00000619336 SIL1Q9H173 461 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 SALL1Q9NSC2 1324 aa18.22■□□□□ 0.51
TMCO3-209ENST00000619336 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
TMCO3-209ENST00000619336 PHKA1P46020 1223 aa18.21■□□□□ 0.51
TMCO3-209ENST00000619336 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
TMCO3-209ENST00000619336 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
TMCO3-209ENST00000619336 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
TMCO3-209ENST00000619336 AGTPBP1Q9UPW5 1226 aa18.21■□□□□ 0.51
TMCO3-209ENST00000619336 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
TMCO3-209ENST00000619336 CAPN2P17655 700 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 PICALMQ13492 652 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 GDF15Q99988 308 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
TMCO3-209ENST00000619336 DENND2AQ9ULE3 1009 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
TMCO3-209ENST00000619336 GAKO14976 1311 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 PTPRCP08575 1304 aa18.2■□□□□ 0.5
TMCO3-209ENST00000619336 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
TMCO3-209ENST00000619336 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
TMCO3-209ENST00000619336 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 SYN1P17600 705 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 TRIM32Q13049 653 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 Q7L0L9 218 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
TMCO3-209ENST00000619336 DEFB123Q8N688 67 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 CEP126Q9P2H0 1117 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
TMCO3-209ENST00000619336 SEMA3EO15041 775 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 HMGCRP04035 888 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 ADORA1P30542 326 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 BMP8BP34820 402 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 BTDP43251 543 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 ABCF2Q9UG63 623 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
TMCO3-209ENST00000619336 CIAO1O76071 339 aa18.16■□□□□ 0.5
TMCO3-209ENST00000619336 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
TMCO3-209ENST00000619336 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
TMCO3-209ENST00000619336 ANKLE1Q8NAG6 615 aa18.16■□□□□ 0.5
TMCO3-209ENST00000619336 PLXNB2O15031 1838 aa18.16■□□□□ 0.5
TMCO3-209ENST00000619336 SPP2Q13103 211 aa18.15■□□□□ 0.5
TMCO3-209ENST00000619336 RASGRF1Q13972 1273 aa18.15■□□□□ 0.5
TMCO3-209ENST00000619336 CCDC102BQ68D86 513 aa18.15■□□□□ 0.5
TMCO3-209ENST00000619336 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
TMCO3-209ENST00000619336 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
TMCO3-209ENST00000619336 NBPF3Q9H094 633 aa18.15■□□□□ 0.5
TMCO3-209ENST00000619336 HMX1Q9NP08 348 aaPredicted RBP18.15■□□□□ 0.5
TMCO3-209ENST00000619336 MAGEA10P43363 369 aaPredicted RBP18.14■□□□□ 0.49
TMCO3-209ENST00000619336 GPR153Q6NV75 609 aa18.14■□□□□ 0.49
TMCO3-209ENST00000619336 FAM9BQ8IZU0 186 aa18.14■□□□□ 0.49
TMCO3-209ENST00000619336 C11orf49Q9H6J7 331 aa18.14■□□□□ 0.49
TMCO3-209ENST00000619336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.49
TMCO3-209ENST00000619336 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
TMCO3-209ENST00000619336 GJD2Q9UKL4 321 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms