RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 POLR3EQ9NVU0 708 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 IFT172Q9UG01 1749 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 N4BP3O15049 544 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 ZEB2O60315 1214 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 METAP2P50579 478 aaKnown RBP eCLIP7.59□□□□□ -1.19
LMO3-235ENST00000616247 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 SLC39A14Q15043 492 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 TSR1Q2NL82 804 aaKnown RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 PLEKHO1Q53GL0 409 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 RNF187Q5TA31 235 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 KRT40Q6A162 431 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 FCHSD1Q86WN1 690 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 NUTM2AQ8IVF1 878 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 ANKRD20A12PQ8NF67 263 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 FAM71BQ8TC56 605 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 RUFY1Q96T51 708 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 NCAPGQ9BPX3 1015 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 BPIFA3Q9BQP9 254 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 ALDH8A1Q9H2A2 487 aaPredicted RBP7.59□□□□□ -1.19
LMO3-235ENST00000616247 C19orf44Q9H6X5 657 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 INTS13Q9NVM9 706 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 MAPK8IP1Q9UQF2 711 aa7.59□□□□□ -1.19
LMO3-235ENST00000616247 COL15A1P39059 1388 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 LRRIQ3A6PVS8 624 aaPredicted RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 ZNF213O14771 459 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 SRGAP2O75044 1071 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 CDC25AP30304 524 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 CASP14P31944 242 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 DNA2P51530 1060 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 USPL1Q5W0Q7 1092 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 CCDC91Q7Z6B0 441 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 FOXP4Q8IVH2 680 aaPredicted RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 ZNF274Q96GC6 653 aaPredicted RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 DACH1Q9UI36 760 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 L1RE1Q9UN81 338 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 NEURL4Q96JN8 1562 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 SBNO1A3KN83 1393 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 ZNF609O15014 1411 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 SHTN1A0MZ66 631 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 KIAA0754O94854 1291 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 ABL1P00519 1130 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 MAP2K2P36507 400 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 IARSP41252 1262 aaKnown RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 CEBPAP49715 358 aaPredicted RBP7.58□□□□□ -1.2
LMO3-235ENST00000616247 STIM1Q13586 685 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 POSTNQ15063 836 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 TADA2BQ86TJ2 420 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 BCAS4Q8TDM0 211 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 KIFC2Q96AC6 838 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 EHD4Q9H223 541 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 PSD3Q9NYI0 1048 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 HDAC6Q9UBN7 1215 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 ADGRG1Q9Y653 693 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 ALKQ9UM73 1620 aa7.58□□□□□ -1.2
LMO3-235ENST00000616247 UBE2Q2LH0YL09 131 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 PPFIA4O75335 1185 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 PRR29P0C7W0 189 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 RDXP35241 583 aaKnown RBP7.57□□□□□ -1.2
LMO3-235ENST00000616247 CORO7P57737 925 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 KIAA1328Q86T90 577 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
LMO3-235ENST00000616247 FAM212AQ96EL1 285 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 PSMB7Q99436 277 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.57□□□□□ -1.2
LMO3-235ENST00000616247 HSD3B7Q9H2F3 369 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 ATG3Q9NT62 314 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 MAN1B1Q9UKM7 699 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 KCNJ14Q9UNX9 436 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 TFR2Q9UP52 801 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 PLEKHG2Q9H7P9 1386 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 GOLGA6CA6NDK9 693 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 MAP2K7O14733 419 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 GOLGA6DP0CG33 693 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 GCKRQ14397 625 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 RASSF8Q8NHQ8 419 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 NCOA7Q8NI08 942 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 FAM76AQ8TAV0 307 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 EEF2KMTQ96G04 330 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 JADE2Q9NQC1 790 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 GOLGA6AQ9NYA3 693 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 TRIM10Q9UDY6 481 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 LMTK2Q8IWU2 1503 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 SPDYE2BA6NHP3 402 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 IPO7O95373 1038 aaKnown RBP7.57□□□□□ -1.2
LMO3-235ENST00000616247 SPDYE6P0CI01 402 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 INPP5BP32019 993 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 EXOSC10Q01780 885 aaKnown RBP7.57□□□□□ -1.2
LMO3-235ENST00000616247 SPDYE2Q495Y8 402 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 MAP9Q49MG5 647 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 SLC9C2Q5TAH2 1124 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 MMS22LQ6ZRQ5 1243 aa7.57□□□□□ -1.2
LMO3-235ENST00000616247 TMEM139Q8IV31 216 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms