RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PTH1RQ03431 593 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 LRRFIP1Q32MZ4 808 aaKnown RBP15.21■□□□□ 0.03
FOXN3-219ENST00000615335 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.21■□□□□ 0.03
FOXN3-219ENST00000615335 RASSF4Q9H2L5 321 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 PAXBP1Q9Y5B6 917 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 SNED1Q8TER0 1413 aa15.21■□□□□ 0.03
FOXN3-219ENST00000615335 IL1R1P14778 569 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 CPA1P15085 419 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 NMIQ13287 307 aaPredicted RBP15.21■□□□□ 0.02
FOXN3-219ENST00000615335 AOC3Q16853 763 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 FAM227BQ96M60 508 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 PDRG1Q9NUG6 133 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 ATP6V1DQ9Y5K8 247 aa15.21■□□□□ 0.02
FOXN3-219ENST00000615335 RAD51AP2Q09MP3 1159 aa15.2■□□□□ 0.02
FOXN3-219ENST00000615335 CCDC183Q5T5S1 534 aa15.2■□□□□ 0.02
FOXN3-219ENST00000615335 JAKMIP1Q96N16 626 aaKnown RBP15.2■□□□□ 0.02
FOXN3-219ENST00000615335 PSMD1Q99460 953 aa15.2■□□□□ 0.02
FOXN3-219ENST00000615335 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
FOXN3-219ENST00000615335 USP25Q9UHP3 1055 aa15.2■□□□□ 0.02
FOXN3-219ENST00000615335 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 F13A1P00488 732 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 SLFNL1Q499Z3 407 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 SLC9C2Q5TAH2 1124 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 VPS53Q5VIR6 699 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 DBNDD1Q9H9R9 158 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 RFX7Q2KHR2 1363 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 PPIP5K2O43314 1243 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 ZSCAN25Q6NSZ9 544 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 KCNB2Q92953 911 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 CYP46A1Q9Y6A2 500 aa15.19■□□□□ 0.02
FOXN3-219ENST00000615335 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
FOXN3-219ENST00000615335 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 LARGE1O95461 756 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
FOXN3-219ENST00000615335 NOP2P46087 812 aaKnown RBP15.18■□□□□ 0.02
FOXN3-219ENST00000615335 UBE2HP62256 183 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 TICAM2Q86XR7 235 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 CCDC83Q8IWF9 413 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 WDR66Q8TBY9 1149 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 ZSWIM6Q9HCJ5 1215 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 SH2B1Q9NRF2 756 aaPredicted RBP15.18■□□□□ 0.02
FOXN3-219ENST00000615335 RAI14Q9P0K7 980 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 MYH7P12883 1935 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 CHD4Q14839 1912 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 FBXW7Q969H0 707 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 RSPH14Q9UHP6 348 aa15.18■□□□□ 0.02
FOXN3-219ENST00000615335 ZKSCAN1P17029 563 aaPredicted RBP15.17■□□□□ 0.02
FOXN3-219ENST00000615335 GJB2P29033 226 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 GTF2IP78347 998 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 MUM1L1Q5H9M0 696 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 PODNQ7Z5L7 613 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 ADD2P35612 726 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 SEC62Q99442 399 aaKnown RBP15.17■□□□□ 0.02
FOXN3-219ENST00000615335 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
FOXN3-219ENST00000615335 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
FOXN3-219ENST00000615335 ECE2O60344 883 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 KDM4AO75164 1064 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 PDE6AP16499 860 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 MCMDC2Q4G0Z9 681 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 CCDC112Q8NEF3 446 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 DOCK2Q92608 1830 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 FIBPO43427 364 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 PRDX5P30044 214 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 ZMYM1Q5SVZ6 1142 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 NCAPGQ9BPX3 1015 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 HELLSQ9NRZ9 838 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 RBM8AQ9Y5S9 174 aaKnown RBP15.16■□□□□ 0.02
FOXN3-219ENST00000615335 ZNF532Q9HCE3 1301 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 FER1L6Q2WGJ9 1857 aa15.16■□□□□ 0.02
FOXN3-219ENST00000615335 MFSD14BQ5SR56 506 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 ICE2Q659A1 982 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 SPTY2D1Q68D10 685 aaPredicted RBP15.15■□□□□ 0.02
FOXN3-219ENST00000615335 KCNQ5Q9NR82 932 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 PYCARDQ9ULZ3 195 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 DHX16O60231 1041 aaKnown RBP15.15■□□□□ 0.02
FOXN3-219ENST00000615335 UBE3CQ15386 1083 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 TXLNBQ8N3L3 684 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 APPBP2Q92624 585 aa15.15■□□□□ 0.02
FOXN3-219ENST00000615335 OSBP2Q969R2 916 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms