RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	RAB11FIP4	Q86YS3	637 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	CCDC65	Q8IXS2	484 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	DCC	P43146	1447 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	SYCE3	A1L190	88 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	SMTN	P53814	917 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	TDRD12	Q587J7	1177 aa	Known RBP	10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	TGFBRAP1	Q8WUH2	860 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	MAP7D2	Q96T17	732 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	GBP3	Q9H0R5	595 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	GPCPD1	Q9NPB8	672 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	WWC3	Q9ULE0	1092 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	SLC27A2	O14975	620 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	PRPH	P41219	470 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	PDE8B	O95263	885 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	GRAP	Q13588	217 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	ARMC9	Q7Z3E5	817 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	FAM177A1	Q8N128	213 aa	Predicted RBP	10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	IQUB	Q8NA54	791 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	GRAPL	Q8TC17	118 aa	Predicted RBP	10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	DDX12P	Q92771	950 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	LRRC2	Q9BYS8	371 aa		10.86	□□□□□ -0.67
NCAM1-222	ENST00000615285	UBE3C	Q15386	1083 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	TTLL6	Q8N841	843 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	NECAB1	Q8N987	351 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	PIGB	Q92521	554 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285		B4E1Z4	1266 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	NOP56	O00567	594 aa	Known RBP	10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	EIF3J	O75822	258 aa	Known RBP	10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	AK2	P54819	239 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	CCNA1	P78396	465 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	MAP3K9	P80192	1104 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	CCDC112	Q8NEF3	446 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	ATP8A2	Q9NTI2	1148 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	PPARA	Q07869	468 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	GNPTAB	Q3T906	1256 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	IFT74	Q96LB3	600 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	AZI2	Q9H6S1	392 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	USP25	Q9UHP3	1055 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	SGSM2	O43147	1006 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	AKNAD1	Q5T1N1	836 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	FILIP1	Q7Z7B0	1213 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	MAPKAPK5	Q8IW41	473 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	HAUS7	Q99871	368 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	TCHP	Q9BT92	498 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	PIM2	Q9P1W9	311 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	NARF	Q9UHQ1	456 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	PIK3C2B	O00750	1634 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	CARMIL3	Q8ND23	1372 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	KCNQ3	O43525	872 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	GALNT17	Q6IS24	598 aa		10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285	TFIP11	Q9UBB9	837 aa	Known RBP	10.85	□□□□□ -0.67
NCAM1-222	ENST00000615285		M0QZ92	97 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	USP26	Q9BXU7	913 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	USP44	Q9H0E7	712 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	TAOK3	Q9H2K8	898 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	MRPL11	Q9Y3B7	192 aa	Known RBP	10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	NEFH	P12036	1026 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	OSBP	P22059	807 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	DNM2	P50570	870 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	NONO	Q15233	471 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	SV2B	Q7L1I2	683 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	HACE1	Q8IYU2	909 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	DHX36	Q9H2U1	1008 aa	Known RBP	10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	COA1	Q9GZY4	146 aa		10.84	□□□□□ -0.67
NCAM1-222	ENST00000615285	TM6SF1	Q9BZW5	370 aa		10.83	□□□□□ -0.67
NCAM1-222	ENST00000615285	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	BTD	P43251	543 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	NLRP10	Q86W26	655 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	PNMA6E	A0A0J9YXQ4	647 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	IGSF3	O75054	1194 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	PAFAH1B1	P43034	410 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	DDAH1	O94760	285 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	CERKL	Q49MI3	558 aa	Predicted RBP	10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	KLHDC4	Q8TBB5	520 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	NAA15	Q9BXJ9	866 aa	Known RBP	10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	CLIP2	Q9UDT6	1046 aa		10.83	□□□□□ -0.68
NCAM1-222	ENST00000615285	MCM7	P33993	719 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	KIDINS220	Q9ULH0	1771 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	PTPRU	Q92729	1446 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	TFAP4	Q01664	338 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	ERFE	Q4G0M1	354 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	BARGIN	Q6ZT62	677 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	SYNC	Q9H7C4	482 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	CEP83	Q9Y592	693 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	CTNNA2	P26232	953 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	USP8	P40818	1118 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	SNX16	P57768	344 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	TCP10	Q12799	353 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	KLHL40	Q2TBA0	621 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	SPAG5	Q96R06	1193 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	LARP6	Q9BRS8	491 aa	Known RBP	10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	BSDC1	Q9NW68	430 aa	Predicted RBP	10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	COL15A1	P39059	1388 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	N4BP3	O15049	544 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	GREM2	Q9H772	168 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	PREX1	Q8TCU6	1659 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	STRN3	Q13033	797 aa		10.82	□□□□□ -0.68
NCAM1-222	ENST00000615285	MAP9	Q49MG5	647 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms