RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PRDM1O75626 825 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 ADCY5O95622 1261 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 KIAA1524Q8TCG1 905 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 DSCC1Q9BVC3 393 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 GNL3LQ9NVN8 582 aaKnown RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 MINDY4BA8MYZ0 360 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 SLFN14P0C7P3 912 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 GTF2IP78347 998 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 CCT2P78371 535 aaKnown RBP11.63□□□□□ -0.55
GGA3-221ENST00000614198 SYCP1Q15431 976 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
GGA3-221ENST00000614198 CYP2D6P10635 497 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 RRP12Q5JTH9 1297 aaKnown RBP11.62□□□□□ -0.55
GGA3-221ENST00000614198 NAA16Q6N069 864 aaPredicted RBP11.62□□□□□ -0.55
GGA3-221ENST00000614198 NEDD4P46934 1319 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 BBOX1O75936 387 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 ZFYP08048 801 aaPredicted RBP11.62□□□□□ -0.55
GGA3-221ENST00000614198 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 ATP6V0A2Q9Y487 856 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 DOCK2Q92608 1830 aa11.62□□□□□ -0.55
GGA3-221ENST00000614198 B4E1Z4 1266 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 H0YIN7 160 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 NPR1P16066 1061 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 DPP8Q6V1X1 898 aaPredicted RBP11.61□□□□□ -0.55
GGA3-221ENST00000614198 CYB5R4Q7L1T6 521 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 RIOK1Q9BRS2 568 aaKnown RBP11.61□□□□□ -0.55
GGA3-221ENST00000614198 CTNNA3Q9UI47 895 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 CCDC66A2RUB6 948 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 ZNF213O14771 459 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 JAK2O60674 1132 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 BRD1O95696 1058 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 PDE6BP35913 854 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 SCNN1DP51172 638 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 ANTXR2P58335 489 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
GGA3-221ENST00000614198 SECISBP2LQ93073 1101 aaKnown RBP11.61□□□□□ -0.55
GGA3-221ENST00000614198 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 RFX7Q2KHR2 1363 aa11.61□□□□□ -0.55
GGA3-221ENST00000614198 TPM3P06753 285 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 TDO2P48775 406 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DRC7Q8IY82 874 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 CERS5Q8N5B7 392 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DUOX1Q9NRD9 1551 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 NRXN2Q9P2S2 1712 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DPEP1P16444 411 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 AOC3Q16853 763 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 MFSD14BQ5SR56 506 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 UBE2Q2LH0YL09 131 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 IMMTQ16891 758 aaKnown RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 NAPBQ9H115 298 aa11.6□□□□□ -0.55
GGA3-221ENST00000614198 MORC2Q9Y6X9 1032 aaPredicted RBP11.6□□□□□ -0.55
GGA3-221ENST00000614198 PATL2C9JE40 543 aaKnown RBP11.59□□□□□ -0.55
GGA3-221ENST00000614198 KCNA3P22001 575 aa11.59□□□□□ -0.55
GGA3-221ENST00000614198 SH3RF3Q8TEJ3 882 aaPredicted RBP11.59□□□□□ -0.55
GGA3-221ENST00000614198 ZNF804AQ7Z570 1209 aa11.59□□□□□ -0.55
GGA3-221ENST00000614198 SAP30BPQ9UHR5 308 aaKnown RBP11.59□□□□□ -0.55
GGA3-221ENST00000614198 SCAF8Q9UPN6 1271 aaKnown RBP11.59□□□□□ -0.55
GGA3-221ENST00000614198 USP17L8P0C7I0 530 aa11.58□□□□□ -0.55
GGA3-221ENST00000614198 GJB4Q9NTQ9 266 aa11.58□□□□□ -0.55
GGA3-221ENST00000614198 ADAMTSL1Q8N6G6 1762 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 NMT2O60551 498 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
GGA3-221ENST00000614198 EXOSC10Q01780 885 aaKnown RBP11.58□□□□□ -0.56
GGA3-221ENST00000614198 CUL4AQ13619 759 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 TERF2Q15554 542 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 FAM173BQ6P4H8 233 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 TIGD1Q96MW7 591 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 TM6SF1Q9BZW5 370 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 ZC3H12CQ9C0D7 883 aaKnown RBP11.58□□□□□ -0.56
GGA3-221ENST00000614198 ATP2B4P23634 1241 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 PSMA5P28066 241 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 CACNB3P54284 484 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 SCRN1Q12765 414 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
GGA3-221ENST00000614198 PYCARDQ9ULZ3 195 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 CENPFP49454 3210 aa11.58□□□□□ -0.56
GGA3-221ENST00000614198 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 USP17L21D6R901 530 aa11.57□□□□□ -0.56
GGA3-221ENST00000614198 FIBPO43427 364 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms