RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PPATQ06203 517 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 PPIL2Q13356 520 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 ZFPM1Q8IX07 1006 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 R3HDMLQ9H3Y0 253 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 EXOC6BQ9Y2D4 811 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 CCL15-CCL14A0A0B4J2E2 113 aa22.3■■□□□ 1.16
VCX3A-203ENST00000612369 CCL15Q16663 113 aa22.3■■□□□ 1.16
VCX3A-203ENST00000612369 BRI3BPQ8WY22 251 aa22.3■■□□□ 1.16
VCX3A-203ENST00000612369 CCDC8Q9H0W5 538 aaPredicted RBP22.3■■□□□ 1.16
VCX3A-203ENST00000612369 SNRKQ9NRH2 765 aa22.3■■□□□ 1.16
VCX3A-203ENST00000612369 CETPP11597 493 aa22.29■■□□□ 1.16
VCX3A-203ENST00000612369 INPP5BP32019 993 aa22.29■■□□□ 1.16
VCX3A-203ENST00000612369 MAP3K10Q02779 954 aa22.29■■□□□ 1.16
VCX3A-203ENST00000612369 SNAPC2Q13487 334 aa22.29■■□□□ 1.16
VCX3A-203ENST00000612369 NOL9Q5SY16 702 aaKnown RBP22.29■■□□□ 1.16
VCX3A-203ENST00000612369 ZSCAN29Q8IWY8 852 aaPredicted RBP22.29■■□□□ 1.16
VCX3A-203ENST00000612369 NOL10Q9BSC4 688 aaKnown RBP22.29■■□□□ 1.16
VCX3A-203ENST00000612369 ATRNL1Q5VV63 1379 aa22.28■■□□□ 1.16
VCX3A-203ENST00000612369 IRF6O14896 467 aa22.28■■□□□ 1.16
VCX3A-203ENST00000612369 CYP2E1P05181 493 aaPredicted RBP22.28■■□□□ 1.16
VCX3A-203ENST00000612369 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
VCX3A-203ENST00000612369 DDX4Q9NQI0 724 aaKnown RBP22.28■■□□□ 1.16
VCX3A-203ENST00000612369 DOCK2Q92608 1830 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 BAG3O95817 575 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 CRHR2Q13324 411 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 PICALMQ13492 652 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 NAA16Q6N069 864 aaPredicted RBP22.27■■□□□ 1.16
VCX3A-203ENST00000612369 SH3BP5LQ7L8J4 393 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 RHPN1Q8TCX5 695 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 KIF1BPQ96EK5 621 aa22.27■■□□□ 1.16
VCX3A-203ENST00000612369 TLR7Q9NYK1 1049 aaKnown RBP22.27■■□□□ 1.16
VCX3A-203ENST00000612369 DDTLA6NHG4 134 aaPredicted RBP22.26■■□□□ 1.15
VCX3A-203ENST00000612369 PLCG2P16885 1265 aa22.26■■□□□ 1.15
VCX3A-203ENST00000612369 ZAP70P43403 619 aa22.26■■□□□ 1.15
VCX3A-203ENST00000612369 AACSQ86V21 672 aa22.26■■□□□ 1.15
VCX3A-203ENST00000612369 ZFYVE28Q9HCC9 887 aa22.26■■□□□ 1.15
VCX3A-203ENST00000612369 COL2A1P02458 1487 aaPredicted RBP22.26■■□□□ 1.15
VCX3A-203ENST00000612369 PHF20L1A8MW92 1017 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 TBC1D12O60347 775 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 PPP4CP60510 307 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 TMED8Q6PL24 325 aaPredicted RBP22.25■■□□□ 1.15
VCX3A-203ENST00000612369 SIRT2Q8IXJ6 389 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 CLASRPQ8N2M8 674 aaKnown RBP22.25■■□□□ 1.15
VCX3A-203ENST00000612369 KCNH4Q9UQ05 1017 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 MAST2Q6P0Q8 1798 aa22.25■■□□□ 1.15
VCX3A-203ENST00000612369 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
VCX3A-203ENST00000612369 TAF1CQ15572 869 aaPredicted RBP22.24■■□□□ 1.15
VCX3A-203ENST00000612369 TEX11Q8IYF3 940 aa22.24■■□□□ 1.15
VCX3A-203ENST00000612369 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
VCX3A-203ENST00000612369 ERO1AQ96HE7 468 aa22.24■■□□□ 1.15
VCX3A-203ENST00000612369 SP3Q02447 781 aa22.23■■□□□ 1.15
VCX3A-203ENST00000612369 FBXO46Q6PJ61 603 aaPredicted RBP22.23■■□□□ 1.15
VCX3A-203ENST00000612369 SCYL3Q8IZE3 742 aa22.23■■□□□ 1.15
VCX3A-203ENST00000612369 OSBPL5Q9H0X9 879 aaPredicted RBP22.23■■□□□ 1.15
VCX3A-203ENST00000612369 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
VCX3A-203ENST00000612369 CXCL11O14625 94 aa22.22■■□□□ 1.15
VCX3A-203ENST00000612369 CTNND1O60716 968 aaKnown RBP22.22■■□□□ 1.15
VCX3A-203ENST00000612369 RGS19P49795 217 aa22.22■■□□□ 1.15
VCX3A-203ENST00000612369 PIH1D3Q9NQM4 214 aaKnown RBP22.22■■□□□ 1.15
VCX3A-203ENST00000612369 PICK1Q9NRD5 415 aa22.22■■□□□ 1.15
VCX3A-203ENST00000612369 AATFQ9NY61 560 aaKnown RBP eCLIP22.22■■□□□ 1.15
VCX3A-203ENST00000612369 BTBD19C9JJ37 291 aa22.21■■□□□ 1.15
VCX3A-203ENST00000612369 C20orf194Q5TEA3 1177 aa22.21■■□□□ 1.15
VCX3A-203ENST00000612369 CERS3Q8IU89 383 aa22.21■■□□□ 1.15
VCX3A-203ENST00000612369 SH3RF3Q8TEJ3 882 aaPredicted RBP22.21■■□□□ 1.15
VCX3A-203ENST00000612369 DHX36Q9H2U1 1008 aaKnown RBP22.21■■□□□ 1.15
VCX3A-203ENST00000612369 HPS5Q9UPZ3 1129 aa22.21■■□□□ 1.15
VCX3A-203ENST00000612369 ARHGEF6Q15052 776 aa22.2■■□□□ 1.14
VCX3A-203ENST00000612369 ANKRD23Q86SG2 305 aa22.2■■□□□ 1.14
VCX3A-203ENST00000612369 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.2■■□□□ 1.14
VCX3A-203ENST00000612369 IDH1O75874 414 aaKnown RBP22.19■■□□□ 1.14
VCX3A-203ENST00000612369 IFIT2P09913 472 aaKnown RBP22.19■■□□□ 1.14
VCX3A-203ENST00000612369 PTPRAP18433 802 aa22.19■■□□□ 1.14
VCX3A-203ENST00000612369 MAP3K12Q12852 859 aa22.19■■□□□ 1.14
VCX3A-203ENST00000612369 TTF1Q15361 905 aaPredicted RBP22.19■■□□□ 1.14
VCX3A-203ENST00000612369 ADGRA1Q86SQ6 560 aa22.19■■□□□ 1.14
VCX3A-203ENST00000612369 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.19■■□□□ 1.14
VCX3A-203ENST00000612369 PI4KBQ9UBF8 816 aa22.19■■□□□ 1.14
VCX3A-203ENST00000612369 HERC5Q9UII4 1024 aaKnown RBP22.19■■□□□ 1.14
VCX3A-203ENST00000612369 TRIM17Q9Y577 477 aa22.19■■□□□ 1.14
VCX3A-203ENST00000612369 MYO5AQ9Y4I1 1855 aaKnown RBP22.18■■□□□ 1.14
VCX3A-203ENST00000612369 APBB1O00213 710 aa22.18■■□□□ 1.14
VCX3A-203ENST00000612369 TLR2O60603 784 aa22.18■■□□□ 1.14
VCX3A-203ENST00000612369 CYP7A1P22680 504 aa22.18■■□□□ 1.14
VCX3A-203ENST00000612369 OTOP1Q7RTM1 612 aa22.18■■□□□ 1.14
VCX3A-203ENST00000612369 ZHX2Q9Y6X8 837 aa22.18■■□□□ 1.14
VCX3A-203ENST00000612369 CD99L2Q8TCZ2 262 aa22.17■■□□□ 1.14
VCX3A-203ENST00000612369 TGFBRAP1Q8WUH2 860 aa22.17■■□□□ 1.14
VCX3A-203ENST00000612369 EFCC1Q9HA90 598 aa22.17■■□□□ 1.14
VCX3A-203ENST00000612369 AFG3L2Q9Y4W6 797 aa22.17■■□□□ 1.14
VCX3A-203ENST00000612369 MOGSQ13724 837 aa22.16■■□□□ 1.14
VCX3A-203ENST00000612369 FASTKD5Q7L8L6 764 aaKnown RBP22.16■■□□□ 1.14
VCX3A-203ENST00000612369 MAGEB6Q8N7X4 407 aa22.16■■□□□ 1.14
VCX3A-203ENST00000612369 ANTXR1Q9H6X2 564 aa22.16■■□□□ 1.14
VCX3A-203ENST00000612369 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 FLT1P17948 1338 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 A0A0G2JLL6 359 aaPredicted RBP22.15■■□□□ 1.14
VCX3A-203ENST00000612369 PDHXO00330 501 aa22.15■■□□□ 1.14
VCX3A-203ENST00000612369 PRRT2Q7Z6L0 340 aaPredicted RBP22.15■■□□□ 1.14
VCX3A-203ENST00000612369 FOXP4Q8IVH2 680 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms