RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 TSHZ3Q63HK5 1081 aa31.62■■■□□ 2.65
VEGFA-226ENST00000611736 GPATCH3Q96I76 525 aa31.62■■■□□ 2.65
VEGFA-226ENST00000611736 UNCXA6NJT0 531 aa31.61■■■□□ 2.65
VEGFA-226ENST00000611736 PLCG2P16885 1265 aa31.61■■■□□ 2.65
VEGFA-226ENST00000611736 PPP4CP60510 307 aa31.61■■■□□ 2.65
VEGFA-226ENST00000611736 MAP3K9P80192 1104 aa31.61■■■□□ 2.65
VEGFA-226ENST00000611736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.61■■■□□ 2.651e-6■□□□□ 11.1
VEGFA-226ENST00000611736 DYNLL1P63167 89 aaKnown RBP31.6■■■□□ 2.65
VEGFA-226ENST00000611736 ANKRD45Q5TZF3 282 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 SPRYD7Q5W111 196 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.6■■■□□ 2.65
VEGFA-226ENST00000611736 SH3BP5LQ7L8J4 393 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 MIGA1Q8NAN2 632 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 GCC1Q96CN9 775 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 WRNIP1Q96S55 665 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 CSRNP1Q96S65 589 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 ZNF341Q9BYN7 854 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 ELP3Q9H9T3 547 aa31.6■■■□□ 2.65
VEGFA-226ENST00000611736 ZBTB47Q9UFB7 747 aaPredicted RBP31.6■■■□□ 2.65
VEGFA-226ENST00000611736 VGLL4Q14135 290 aa31.59■■■□□ 2.65
VEGFA-226ENST00000611736 WNK4Q96J92 1243 aa31.59■■■□□ 2.65
VEGFA-226ENST00000611736 CSADQ9Y600 493 aa31.59■■■□□ 2.65
VEGFA-226ENST00000611736 DDTLA6NHG4 134 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-226ENST00000611736 NPM3O75607 178 aaKnown RBP31.58■■■□□ 2.65
VEGFA-226ENST00000611736 PDE6AP16499 860 aa31.58■■■□□ 2.65
VEGFA-226ENST00000611736 SLC9C2Q5TAH2 1124 aa31.58■■■□□ 2.65
VEGFA-226ENST00000611736 OTUD7AQ8TE49 926 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-226ENST00000611736 RWDD1Q9H446 243 aaPredicted RBP31.58■■■□□ 2.65
VEGFA-226ENST00000611736 CDK5RAP2Q96SN8 1893 aa31.57■■■□□ 2.64
VEGFA-226ENST00000611736 TMED8Q6PL24 325 aaPredicted RBP31.56■■■□□ 2.64
VEGFA-226ENST00000611736 TNS4Q8IZW8 715 aa31.56■■■□□ 2.64
VEGFA-226ENST00000611736 TGFBRAP1Q8WUH2 860 aa31.56■■■□□ 2.64
VEGFA-226ENST00000611736 OSBPL5Q9H0X9 879 aaPredicted RBP31.56■■■□□ 2.64
VEGFA-226ENST00000611736 PRDM10Q9NQV6 1147 aa31.56■■■□□ 2.64
VEGFA-226ENST00000611736 TSKSQ9UJT2 592 aa31.56■■■□□ 2.64
VEGFA-226ENST00000611736 MAPKAPK5Q8IW41 473 aa31.55■■■□□ 2.64
VEGFA-226ENST00000611736 ZKSCAN4Q969J2 545 aaPredicted RBP31.55■■■□□ 2.64
VEGFA-226ENST00000611736 ATRNL1Q5VV63 1379 aa31.55■■■□□ 2.64
VEGFA-226ENST00000611736 ZNF532Q9HCE3 1301 aa31.54■■■□□ 2.64
VEGFA-226ENST00000611736 GJA5P36382 358 aa31.54■■■□□ 2.64
VEGFA-226ENST00000611736 REM2Q8IYK8 340 aaPredicted RBP31.54■■■□□ 2.64
VEGFA-226ENST00000611736 CNKSR2Q8WXI2 1034 aa31.54■■■□□ 2.64
VEGFA-226ENST00000611736 OPTNQ96CV9 577 aa31.54■■■□□ 2.64
VEGFA-226ENST00000611736 IGHDP01880 384 aa31.53■■■□□ 2.64
VEGFA-226ENST00000611736 SLURP2P0DP57 97 aa31.53■■■□□ 2.64
VEGFA-226ENST00000611736 ZBTB48P10074 688 aaPredicted RBP31.53■■■□□ 2.64
VEGFA-226ENST00000611736 HSPA8P11142 646 aaKnown RBP31.53■■■□□ 2.64
VEGFA-226ENST00000611736 INPP5BP32019 993 aa31.53■■■□□ 2.64
VEGFA-226ENST00000611736 SNCAIPQ9Y6H5 919 aa31.53■■■□□ 2.64
VEGFA-226ENST00000611736 FOCADQ5VW36 1801 aa31.53■■■□□ 2.64
VEGFA-226ENST00000611736 FLT1P17948 1338 aa31.52■■■□□ 2.64
VEGFA-226ENST00000611736 MYH7P12883 1935 aa31.52■■■□□ 2.64
VEGFA-226ENST00000611736 CA12O43570 354 aa31.52■■■□□ 2.64
VEGFA-226ENST00000611736 LBX1P52954 281 aa31.52■■■□□ 2.64
VEGFA-226ENST00000611736 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.52■■■□□ 2.641e-12■■■□□ 17.3
VEGFA-226ENST00000611736 TTC41PQ6P2S7 1318 aa31.51■■■□□ 2.64
VEGFA-226ENST00000611736 TCRBV5S4A2TA0A5A2 114 aa31.51■■■□□ 2.63
VEGFA-226ENST00000611736 SLFNL1Q499Z3 407 aa31.51■■■□□ 2.63
VEGFA-226ENST00000611736 CERS3Q8IU89 383 aa31.51■■■□□ 2.63
VEGFA-226ENST00000611736 ZNF112Q9UJU3 913 aa31.51■■■□□ 2.63
VEGFA-226ENST00000611736 COL2A1P02458 1487 aaPredicted RBP31.51■■■□□ 2.63
VEGFA-226ENST00000611736 MAGEB6P1A0A0J9YX57 407 aa31.5■■■□□ 2.63
VEGFA-226ENST00000611736 MX1P20591 662 aa31.5■■■□□ 2.63
VEGFA-226ENST00000611736 SREBF2Q12772 1141 aa31.5■■■□□ 2.63
VEGFA-226ENST00000611736 B4GALNT3Q6L9W6 998 aa31.5■■■□□ 2.63
VEGFA-226ENST00000611736 RNF186Q9NXI6 227 aa31.5■■■□□ 2.63
VEGFA-226ENST00000611736 ADD2P35612 726 aa31.49■■■□□ 2.63
VEGFA-226ENST00000611736 USP5P45974 858 aa31.49■■■□□ 2.63
VEGFA-226ENST00000611736 SMC5Q8IY18 1101 aa31.49■■■□□ 2.63
VEGFA-226ENST00000611736 OTUD5Q96G74 571 aa31.49■■■□□ 2.63
VEGFA-226ENST00000611736 RIOK1Q9BRS2 568 aaKnown RBP31.49■■■□□ 2.63
VEGFA-226ENST00000611736 SAP30BPQ9UHR5 308 aaKnown RBP31.49■■■□□ 2.63
VEGFA-226ENST00000611736 MANSC4A6NHS7 340 aaPredicted RBP31.48■■■□□ 2.63
VEGFA-226ENST00000611736 ERC2O15083 957 aa31.48■■■□□ 2.63
VEGFA-226ENST00000611736 TRPA1O75762 1119 aa31.48■■■□□ 2.63
VEGFA-226ENST00000611736 TM4SF4P48230 202 aa31.48■■■□□ 2.63
VEGFA-226ENST00000611736 PI4K2BQ8TCG2 481 aa31.48■■■□□ 2.63
VEGFA-226ENST00000611736 SPDYE5A6NIY4 337 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 FAM196BA6NMK8 535 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 CHGBP05060 677 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 MAP3K10Q02779 954 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 LNPKQ9C0E8 428 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 SALL3Q9BXA9 1300 aa31.47■■■□□ 2.63
VEGFA-226ENST00000611736 PHF20L1A8MW92 1017 aa31.46■■■□□ 2.63
VEGFA-226ENST00000611736 GLRX3O76003 335 aaKnown RBP31.46■■■□□ 2.63
VEGFA-226ENST00000611736 ERO1BQ86YB8 467 aa31.46■■■□□ 2.63
VEGFA-226ENST00000611736 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.46■■■□□ 2.633e-7■■■■■ 34.2
VEGFA-226ENST00000611736 SAGE1Q9NXZ1 904 aa31.46■■■□□ 2.63
VEGFA-226ENST00000611736 PALD1Q9ULE6 856 aa31.46■■■□□ 2.63
VEGFA-226ENST00000611736 MYH1P12882 1939 aa31.45■■■□□ 2.63
VEGFA-226ENST00000611736 SLC4A8Q2Y0W8 1093 aa31.45■■■□□ 2.63
VEGFA-226ENST00000611736 ZSCAN25Q6NSZ9 544 aa31.45■■■□□ 2.63
VEGFA-226ENST00000611736 DHX36Q9H2U1 1008 aaKnown RBP31.45■■■□□ 2.63
VEGFA-226ENST00000611736 TBC1D12O60347 775 aa31.44■■■□□ 2.62
VEGFA-226ENST00000611736 UBE3CQ15386 1083 aa31.44■■■□□ 2.62
VEGFA-226ENST00000611736 NOL9Q5SY16 702 aaKnown RBP31.44■■■□□ 2.62
VEGFA-226ENST00000611736 LCORLQ8N3X6 602 aa31.44■■■□□ 2.62
VEGFA-226ENST00000611736 KBTBD3Q8NAB2 608 aa31.44■■■□□ 2.62
VEGFA-226ENST00000611736 PI4KBQ9UBF8 816 aa31.44■■■□□ 2.62
VEGFA-226ENST00000611736 SIPA1L1O43166 1804 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms