RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ECM2O94769 699 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 RILPL1Q5EBL4 403 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 DTHD1Q6ZMT9 781 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 CCDC186Q7Z3E2 898 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF397Q8NF99 534 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 EXOC1Q9NV70 894 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 VPS54Q9P1Q0 977 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 M0R2C6 588 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 PLS1Q14651 629 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 TMX1Q9H3N1 280 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 LMBRD1Q9NUN5 540 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 UQCRHLA0A096LP55 91 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 KIF20AO95235 890 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 MYCNP04198 464 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 UQCRHP07919 91 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 DYNLL1P63167 89 aaKnown RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 RASGRF1Q13972 1273 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 JAKMIP3Q5VZ66 844 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 FCHSD1Q86WN1 690 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 UIMC1Q96RL1 719 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 TTC12Q9H892 705 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 TNKSO95271 1327 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 TECPR2O15040 1411 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 RPS6KA4O75676 772 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 SLC1A4P43007 532 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 TDRD12Q587J7 1177 aaKnown RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 KRT79Q5XKE5 535 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 TEKT1Q969V4 418 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 SCLT1Q96NL6 688 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 RUFY1Q96T51 708 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 FGFR1OPO95684 399 aaKnown RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 CNKSR2Q8WXI2 1034 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 ERCC4Q92889 916 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF274Q96GC6 653 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-218ENST00000610726 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
CSDE1-218ENST00000610726 ADD2P35612 726 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 TRAF1Q13077 416 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 PRKG1Q13976 671 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 HSP90B2PQ58FF3 399 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 CCDC181Q5TID7 509 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF772Q68DY9 489 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 ERMNQ8TAM6 284 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 MTMR6Q9Y217 621 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 DIP2AQ14689 1571 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 XDHP47989 1333 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 URI1O94763 535 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 MCAMP43121 646 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 BTDP43251 543 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 DNA2P51530 1060 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 DLGAP5Q15398 846 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 SYCP3Q8IZU3 236 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 IQUBQ8NA54 791 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 VWDEQ8N2E2 1590 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 PDIA3P30101 505 aaKnown RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 SPA17Q15506 151 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 ATL3Q6DD88 541 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 FANCBQ8NB91 859 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 PRM3Q9NNZ6 103 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
CSDE1-218ENST00000610726 SPATA31D1Q6ZQQ2 1576 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 NRKQ7Z2Y5 1582 aa8.28□□□□□ -1.08
CSDE1-218ENST00000610726 PFKFB2O60825 505 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 TNNT1P13805 278 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 GSDMDP57764 484 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 SCRN1Q12765 414 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 GRM1Q13255 1194 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 DIXDC1Q155Q3 683 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 SKIDA1Q1XH10 827 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 LCORLQ8N3X6 602 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 ISCA1Q9BUE6 129 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 RMND1Q9NWS8 449 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 KCNH3Q9ULD8 1083 aa8.27□□□□□ -1.08
CSDE1-218ENST00000610726 ZC3H13Q5T200 1668 aaKnown RBP8.27□□□□□ -1.08
CSDE1-218ENST00000610726 POLR2DO15514 142 aaKnown RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 GOLGA8HP0CJ92 632 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 NIM1KQ8IY84 436 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 USP28Q96RU2 1077 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 ZSCAN10Q96SZ4 725 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-218ENST00000610726 DBNDD1Q9H9R9 158 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 PKD2L1Q9P0L9 805 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 LEMD3Q9Y2U8 911 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 PSMA7O14818 248 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 YEATS4O95619 227 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 MMP10P09238 476 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 SP4Q02446 784 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 CERS3Q8IU89 383 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
CSDE1-218ENST00000610726 KIF18AQ8NI77 898 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms