RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MINDY4BA8MYZ0 360 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 USP17L12C9JPN9 530 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 USP17L21D6R901 530 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 HMGB1P09429 215 aaKnown RBP22.05■■□□□ 1.12
SSBP4-212ENST00000601919 PCP11498 1178 aaKnown RBP22.05■■□□□ 1.12
SSBP4-212ENST00000601919 HAND2P61296 217 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 PPARAQ07869 468 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 TRDNQ13061 729 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 CTR9Q6PD62 1173 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 MAPKAPK5Q8IW41 473 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 JAKMIP1Q96N16 626 aaKnown RBP22.05■■□□□ 1.12
SSBP4-212ENST00000601919 IDI2Q9BXS1 227 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 ANAPC4Q9UJX5 808 aa22.05■■□□□ 1.12
SSBP4-212ENST00000601919 GOLGB1Q14789 3259 aaKnown RBP22.05■■□□□ 1.12
SSBP4-212ENST00000601919 WDHD1O75717 1129 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-212ENST00000601919 POLR3DP05423 398 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-212ENST00000601919 LMOD1P29536 600 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-212ENST00000601919 TDRD3Q9H7E2 651 aaKnown RBP22.04■■□□□ 1.12
SSBP4-212ENST00000601919 GPRC5DQ9NZD1 345 aa22.04■■□□□ 1.12
SSBP4-212ENST00000601919 E7EWF7 191 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 ST18O60284 1047 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 BLOC1S2Q6QNY1 142 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 ZBED3Q96IU2 234 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-212ENST00000601919 NEK1Q96PY6 1258 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 CNNM2Q9H8M5 875 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 CYP46A1Q9Y6A2 500 aa22.03■■□□□ 1.12
SSBP4-212ENST00000601919 CASTP20810 708 aaKnown RBP22.02■■□□□ 1.12
SSBP4-212ENST00000601919 PICALMQ13492 652 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 SPDYE2Q495Y8 402 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 AKNAD1Q5T1N1 836 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 FKBP1CQ5VVH2 108 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 MFSD6Q6ZSS7 791 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 RALYLQ86SE5 291 aaKnown RBP22.02■■□□□ 1.12
SSBP4-212ENST00000601919 TTC6Q86TZ1 520 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 NCOA7Q8NI08 942 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 STAG1Q8WVM7 1258 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 PCDHAC2Q9Y5I4 1007 aa22.02■■□□□ 1.12
SSBP4-212ENST00000601919 DDX60LQ5H9U9 1706 aaKnown RBP22.02■■□□□ 1.12
SSBP4-212ENST00000601919 ENTPD3O75355 529 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 DDNO94850 711 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-212ENST00000601919 NT5C2P49902 561 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 NEK4P51957 841 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 KIF4BQ2VIQ3 1234 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 ADCK5Q3MIX3 580 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 C12orf60Q5U649 245 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 KRT23Q9C075 422 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 OSBPL5Q9H0X9 879 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-212ENST00000601919 DHX36Q9H2U1 1008 aaKnown RBP22.01■■□□□ 1.11
SSBP4-212ENST00000601919 ZNF287Q9HBT7 754 aa22.01■■□□□ 1.11
SSBP4-212ENST00000601919 ZNF70Q9UC06 446 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-212ENST00000601919 WNT10BO00744 389 aa22■■□□□ 1.11
SSBP4-212ENST00000601919 HLA-DOAP06340 250 aa22■■□□□ 1.11
SSBP4-212ENST00000601919 PDE4BQ07343 736 aa22■■□□□ 1.11
SSBP4-212ENST00000601919 RUFY3Q7L099 469 aa22■■□□□ 1.11
SSBP4-212ENST00000601919 SAP30BPQ9UHR5 308 aaKnown RBP22■■□□□ 1.11
SSBP4-212ENST00000601919 TAOK2Q9UL54 1235 aa22■■□□□ 1.11
SSBP4-212ENST00000601919 SHTN1A0MZ66 631 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 TNNI2P48788 182 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 CTDSPL2Q05D32 466 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 TNFAIP1Q13829 316 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 BECN1Q14457 450 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 RBM26Q5T8P6 1007 aaKnown RBP21.99■■□□□ 1.11
SSBP4-212ENST00000601919 STOX1Q6ZVD7 989 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 TBC1D10CQ8IV04 446 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 NBPF3Q9H094 633 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 DDX4Q9NQI0 724 aaKnown RBP21.99■■□□□ 1.11
SSBP4-212ENST00000601919 TAF6LQ9Y6J9 622 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
SSBP4-212ENST00000601919 COL2A1P02458 1487 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-212ENST00000601919 GLTPD2A6NH11 291 aa21.98■■□□□ 1.11
SSBP4-212ENST00000601919 MCM2P49736 904 aa21.98■■□□□ 1.11
SSBP4-212ENST00000601919 NFIAQ12857 509 aa21.98■■□□□ 1.11
SSBP4-212ENST00000601919 TBC1D10BQ4KMP7 808 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-212ENST00000601919 DHX32Q7L7V1 743 aaKnown RBP21.98■■□□□ 1.11
SSBP4-212ENST00000601919 SAMD7Q7Z3H4 446 aa21.98■■□□□ 1.11
SSBP4-212ENST00000601919 L3MBTL3Q96JM7 780 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-212ENST00000601919 UPF3BQ9BZI7 483 aaKnown RBP21.98■■□□□ 1.11
SSBP4-212ENST00000601919 VEZTQ9HBM0 779 aa21.98■■□□□ 1.11
SSBP4-212ENST00000601919 CYP2D7A0A087X1C5 515 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 CLRN2A0PK11 232 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 RPS6KB1P23443 525 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 MCM5P33992 734 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 CACNB3P54284 484 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 NBPF9Q3BBW0 867 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 FAM83AQ86UY5 434 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 SNX21Q969T3 373 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 ADARB2Q9NS39 739 aaKnown RBP21.97■■□□□ 1.11
SSBP4-212ENST00000601919 TOMM22Q9NS69 142 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 PDRG1Q9NUG6 133 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 FAM198AQ9UFP1 575 aa21.97■■□□□ 1.11
SSBP4-212ENST00000601919 FGRP09769 529 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 CYP2D6P10635 497 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 TCP10Q12799 353 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 HSCBQ8IWL3 235 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 ZSCAN29Q8IWY8 852 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-212ENST00000601919 FAM151AQ8WW52 585 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 ESR2Q92731 530 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 WDR19Q8NEZ3 1342 aa21.96■■□□□ 1.11
SSBP4-212ENST00000601919 SCN4AP35499 1836 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms