RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 RPAP1Q9BWH6 1393 aaPredicted RBP24.32■■□□□ 1.48
SSBP4-210ENST00000601444 SLURP2P0DP57 97 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 ADD2P35612 726 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 PDE1AP54750 535 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 TGFBRAP1Q8WUH2 860 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 CLMNQ96JQ2 1002 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 STAP2Q9UGK3 403 aa24.32■■□□□ 1.48
SSBP4-210ENST00000601444 ERC2O15083 957 aa24.31■■□□□ 1.48
SSBP4-210ENST00000601444 GLRX3O76003 335 aaKnown RBP24.31■■□□□ 1.48
SSBP4-210ENST00000601444 RASAL3Q86YV0 1011 aa24.31■■□□□ 1.48
SSBP4-210ENST00000601444 PLCG2P16885 1265 aa24.3■■□□□ 1.48
SSBP4-210ENST00000601444 IREB2P48200 963 aaKnown RBP24.3■■□□□ 1.48
SSBP4-210ENST00000601444 MAPKAPK5Q8IW41 473 aa24.3■■□□□ 1.48
SSBP4-210ENST00000601444 ZSCAN29Q8IWY8 852 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-210ENST00000601444 RIOK1Q9BRS2 568 aaKnown RBP24.3■■□□□ 1.48
SSBP4-210ENST00000601444 OSBPL5Q9H0X9 879 aaPredicted RBP24.3■■□□□ 1.48
SSBP4-210ENST00000601444 MAGEB6P1A0A0J9YX57 407 aa24.29■■□□□ 1.48
SSBP4-210ENST00000601444 NPM3O75607 178 aaKnown RBP24.29■■□□□ 1.48
SSBP4-210ENST00000601444 SLC10A3P09131 477 aa24.29■■□□□ 1.48
SSBP4-210ENST00000601444 TMED8Q6PL24 325 aaPredicted RBP24.29■■□□□ 1.48
SSBP4-210ENST00000601444 KBTBD3Q8NAB2 608 aa24.29■■□□□ 1.48
SSBP4-210ENST00000601444 CCDC102AQ96A19 550 aa24.29■■□□□ 1.48
SSBP4-210ENST00000601444 CSRNP1Q96S65 589 aa24.29■■□□□ 1.48
SSBP4-210ENST00000601444 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.29■■□□□ 1.484e-11■■■■■ 50.7
SSBP4-210ENST00000601444 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.28■■□□□ 1.48
SSBP4-210ENST00000601444 PLEKHM2Q8IWE5 1019 aa24.28■■□□□ 1.48
SSBP4-210ENST00000601444 ATRNL1Q5VV63 1379 aa24.28■■□□□ 1.48
SSBP4-210ENST00000601444 MKRN3Q13064 507 aaKnown RBP24.27■■□□□ 1.48
SSBP4-210ENST00000601444 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.27■■□□□ 1.48
SSBP4-210ENST00000601444 SLC10A4Q96EP9 437 aa24.27■■□□□ 1.48
SSBP4-210ENST00000601444 FLT1P17948 1338 aa24.27■■□□□ 1.48
SSBP4-210ENST00000601444 MAP3K9P80192 1104 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 UBE3CQ15386 1083 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 DCAF15Q66K64 600 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 ANKRD13AQ8IZ07 590 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 LCORLQ8N3X6 602 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 ZKSCAN4Q969J2 545 aaPredicted RBP24.26■■□□□ 1.47
SSBP4-210ENST00000601444 HOOK2Q96ED9 719 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 ARMT1Q9H993 441 aa24.26■■□□□ 1.47
SSBP4-210ENST00000601444 CENPBP07199 599 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-210ENST00000601444 PDE4AP27815 886 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 MAP2K2P36507 400 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 KIF23Q02241 960 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-210ENST00000601444 NOGQ13253 232 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 VGLL4Q14135 290 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 ZSCAN25Q6NSZ9 544 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 WRNIP1Q96S55 665 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 ZNF341Q9BYN7 854 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 PUS7LQ9H0K6 701 aaKnown RBP24.25■■□□□ 1.47
SSBP4-210ENST00000601444 ELP3Q9H9T3 547 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 SAP30BPQ9UHR5 308 aaKnown RBP24.25■■□□□ 1.47
SSBP4-210ENST00000601444 PALD1Q9ULE6 856 aa24.25■■□□□ 1.47
SSBP4-210ENST00000601444 FAM196BA6NMK8 535 aa24.24■■□□□ 1.47
SSBP4-210ENST00000601444 INPP5BP32019 993 aa24.24■■□□□ 1.47
SSBP4-210ENST00000601444 USP5P45974 858 aa24.24■■□□□ 1.47
SSBP4-210ENST00000601444 SLC4A8Q2Y0W8 1093 aa24.24■■□□□ 1.47
SSBP4-210ENST00000601444 CNKSR2Q8WXI2 1034 aa24.24■■□□□ 1.47
SSBP4-210ENST00000601444 RNF113AO15541 343 aaKnown RBP24.23■■□□□ 1.47
SSBP4-210ENST00000601444 MBD4O95243 580 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 MAP3K10Q02779 954 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 CERS3Q8IU89 383 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 ZNF112Q9UJU3 913 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 THSD7BQ9C0I4 1608 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 AK9Q5TCS8 1911 aa24.23■■□□□ 1.47
SSBP4-210ENST00000601444 OTOFQ9HC10 1997 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 CDK5RAP2Q96SN8 1893 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 UNCXA6NJT0 531 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 PRKAB2O43741 272 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 GJA5P36382 358 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 SPRYD7Q5W111 196 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 SDR42E1Q8WUS8 393 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 FSD1Q9BTV5 496 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 SNCAIPQ9Y6H5 919 aa24.22■■□□□ 1.47
SSBP4-210ENST00000601444 COL2A1P02458 1487 aaPredicted RBP24.21■■□□□ 1.47
SSBP4-210ENST00000601444 PHF20L1A8MW92 1017 aa24.21■■□□□ 1.47
SSBP4-210ENST00000601444 HSPA1AP0DMV8 641 aaKnown RBP24.21■■□□□ 1.47
SSBP4-210ENST00000601444 HSPA1BP0DMV9 641 aaKnown RBP24.21■■□□□ 1.47
SSBP4-210ENST00000601444 WNK4Q96J92 1243 aa24.21■■□□□ 1.47
SSBP4-210ENST00000601444 CRNKL1Q9BZJ0 848 aaKnown RBP24.21■■□□□ 1.47
SSBP4-210ENST00000601444 OSBPL3Q9H4L5 887 aa24.21■■□□□ 1.47
SSBP4-210ENST00000601444 WBP1LQ9NX94 342 aa24.21■■□□□ 1.47
SSBP4-210ENST00000601444 FOCADQ5VW36 1801 aa24.2■■□□□ 1.46
SSBP4-210ENST00000601444 EVI5LQ96CN4 794 aa24.2■■□□□ 1.46
SSBP4-210ENST00000601444 CSADQ9Y600 493 aa24.2■■□□□ 1.46
SSBP4-210ENST00000601444 APPBP2Q92624 585 aa24.19■■□□□ 1.46
SSBP4-210ENST00000601444 AIDAQ96BJ3 306 aa24.19■■□□□ 1.46
SSBP4-210ENST00000601444 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
SSBP4-210ENST00000601444 SEC62Q99442 399 aaKnown RBP24.19■■□□□ 1.46
SSBP4-210ENST00000601444 DHX36Q9H2U1 1008 aaKnown RBP24.19■■□□□ 1.46
SSBP4-210ENST00000601444 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.19■■□□□ 1.46
SSBP4-210ENST00000601444 PI4KBQ9UBF8 816 aa24.19■■□□□ 1.46
SSBP4-210ENST00000601444 MYH7P12883 1935 aa24.19■■□□□ 1.46
SSBP4-210ENST00000601444 M0R2C6 588 aa24.18■■□□□ 1.46
SSBP4-210ENST00000601444 TBC1D12O60347 775 aa24.18■■□□□ 1.46
SSBP4-210ENST00000601444 ZFYP08048 801 aaPredicted RBP24.18■■□□□ 1.46
SSBP4-210ENST00000601444 MAP2K1Q02750 393 aaPredicted RBP24.18■■□□□ 1.46
SSBP4-210ENST00000601444 EVX2Q03828 476 aa24.18■■□□□ 1.46
SSBP4-210ENST00000601444 DCP1AQ9NPI6 582 aaPredicted RBP24.18■■□□□ 1.46
SSBP4-210ENST00000601444 TRIM6-TRIM34B2RNG4 842 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms