RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 USP5P45974 858 aa27.39■■□□□ 1.98
IRF3-227ENST00000600911 ALX1Q15699 326 aa27.39■■□□□ 1.98
IRF3-227ENST00000600911 SPDYE2Q495Y8 402 aa27.39■■□□□ 1.98
IRF3-227ENST00000600911 DPY19L2Q6NUT2 758 aa27.39■■□□□ 1.98
IRF3-227ENST00000600911 KIF2CQ99661 725 aa27.39■■□□□ 1.98
IRF3-227ENST00000600911 SAP30BPQ9UHR5 308 aaKnown RBP27.39■■□□□ 1.98
IRF3-227ENST00000600911 U3KPZ7 1027 aaPredicted RBP27.39■■□□□ 1.98
IRF3-227ENST00000600911 RPAP1Q9BWH6 1393 aaPredicted RBP27.39■■□□□ 1.97
IRF3-227ENST00000600911 PLCG2P16885 1265 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 CTR9Q6PD62 1173 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 NKX2-3Q8TAU0 364 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 H7C1D1 291 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 TDO2P48775 406 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 RBM25P49756 843 aaKnown RBP27.38■■□□□ 1.97
IRF3-227ENST00000600911 NAPBQ9H115 298 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 ATP8A2Q9NTI2 1148 aa27.38■■□□□ 1.97
IRF3-227ENST00000600911 SLURP2P0DP57 97 aa27.37■■□□□ 1.97
IRF3-227ENST00000600911 STOX1Q6ZVD7 989 aa27.37■■□□□ 1.97
IRF3-227ENST00000600911 KCNB2Q92953 911 aa27.37■■□□□ 1.97
IRF3-227ENST00000600911 INCENPQ9NQS7 918 aa27.37■■□□□ 1.97
IRF3-227ENST00000600911 SNX14Q9Y5W7 946 aa27.37■■□□□ 1.97
IRF3-227ENST00000600911 CNTNAP1P78357 1384 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 ZMYM6O95789 1325 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 USP17L12C9JPN9 530 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 USP17L21D6R901 530 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 EPB41L2O43491 1005 aaKnown RBP27.36■■□□□ 1.97
IRF3-227ENST00000600911 TCP10Q12799 353 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 IDI2Q9BXS1 227 aa27.36■■□□□ 1.97
IRF3-227ENST00000600911 TCP10L2B9ZVM9 353 aa27.35■■□□□ 1.97
IRF3-227ENST00000600911 CTDSPL2Q05D32 466 aa27.35■■□□□ 1.97
IRF3-227ENST00000600911 SH3BP5LQ7L8J4 393 aa27.35■■□□□ 1.97
IRF3-227ENST00000600911 TBC1D10CQ8IV04 446 aa27.35■■□□□ 1.97
IRF3-227ENST00000600911 MCM9Q9NXL9 1143 aa27.35■■□□□ 1.97
IRF3-227ENST00000600911 DCAF8L1A6NGE4 600 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 ADCK5Q3MIX3 580 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 GIMAP6Q6P9H5 292 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 CERS3Q8IU89 383 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 CDAN1Q8IWY9 1227 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 STK11IPQ8N1F8 1099 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 OSBPL5Q9H0X9 879 aaPredicted RBP27.34■■□□□ 1.97
IRF3-227ENST00000600911 VEZTQ9HBM0 779 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 PLCD1P51178 756 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 HACL1Q9UJ83 578 aa27.34■■□□□ 1.97
IRF3-227ENST00000600911 MINDY4BA8MYZ0 360 aa27.33■■□□□ 1.97
IRF3-227ENST00000600911 LMOD1P29536 600 aaPredicted RBP27.33■■□□□ 1.97
IRF3-227ENST00000600911 MMP14P50281 582 aa27.33■■□□□ 1.97
IRF3-227ENST00000600911 NACAP1Q9BZK3 213 aa27.33■■□□□ 1.97
IRF3-227ENST00000600911 UPF2Q9HAU5 1272 aaKnown RBP27.33■■□□□ 1.97
IRF3-227ENST00000600911 ADARB2Q9NS39 739 aaKnown RBP27.33■■□□□ 1.97
IRF3-227ENST00000600911 DDTLA6NHG4 134 aaPredicted RBP27.32■■□□□ 1.96
IRF3-227ENST00000600911 PPARAQ07869 468 aa27.31■■□□□ 1.96
IRF3-227ENST00000600911 SBK1Q52WX2 424 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 C12orf60Q5U649 245 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 DYNLL2Q96FJ2 89 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 CTNNA3Q9UI47 895 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 EIF5BO60841 1220 aaKnown RBP27.3■■□□□ 1.96
IRF3-227ENST00000600911 EPHX2P34913 555 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 ANGEL2Q5VTE6 544 aaKnown RBP27.3■■□□□ 1.96
IRF3-227ENST00000600911 TAF1DQ9H5J8 278 aaPredicted RBP27.3■■□□□ 1.96
IRF3-227ENST00000600911 PGAP2Q9UHJ9 254 aa27.3■■□□□ 1.96
IRF3-227ENST00000600911 ZNF213O14771 459 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 CPA1P15085 419 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 IMMTQ16891 758 aaKnown RBP27.29■■□□□ 1.96
IRF3-227ENST00000600911 DLK2Q6UY11 383 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 TMEM39BQ9GZU3 492 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 GGA3Q9NZ52 723 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 ARPP21Q9UBL0 812 aaPredicted RBP27.29■■□□□ 1.96
IRF3-227ENST00000600911 NEDD4P46934 1319 aa27.29■■□□□ 1.96
IRF3-227ENST00000600911 POTEIP0CG38 1075 aa27.28■■□□□ 1.96
IRF3-227ENST00000600911 POTEJP0CG39 1038 aa27.28■■□□□ 1.96
IRF3-227ENST00000600911 SLC44A5Q8NCS7 719 aa27.28■■□□□ 1.96
IRF3-227ENST00000600911 ZNF526Q8TF50 670 aaPredicted RBP27.28■■□□□ 1.96
IRF3-227ENST00000600911 IL17RAQ96F46 866 aa27.28■■□□□ 1.96
IRF3-227ENST00000600911 E7EWF7 191 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 MYO1BO43795 1136 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 NPM3O75607 178 aaKnown RBP27.27■■□□□ 1.96
IRF3-227ENST00000600911 MCCP23508 829 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 RRAGCQ9HB90 399 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 TMOD2Q9NZR1 351 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 ANAPC4Q9UJX5 808 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 MYH8P13535 1937 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 ENTPD3O75355 529 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 POLR3DP05423 398 aaPredicted RBP27.27■■□□□ 1.96
IRF3-227ENST00000600911 TSGA10IPQ3SY00 556 aa27.27■■□□□ 1.96
IRF3-227ENST00000600911 DNAJC18Q9H819 358 aa27.26■■□□□ 1.95
IRF3-227ENST00000600911 NMRK2Q9NPI5 230 aa27.26■■□□□ 1.95
IRF3-227ENST00000600911 ATRNL1Q5VV63 1379 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 ROBO3Q96MS0 1386 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 FAM196BA6NMK8 535 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 RASA3Q14644 834 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 FKBP1CQ5VVH2 108 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 FAM151AQ8WW52 585 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 DDRGK1Q96HY6 314 aa27.25■■□□□ 1.95
IRF3-227ENST00000600911 COL2A1P02458 1487 aaPredicted RBP27.24■■□□□ 1.95
IRF3-227ENST00000600911 PRDM1O75626 825 aa27.24■■□□□ 1.95
IRF3-227ENST00000600911 RNF20Q5VTR2 975 aa27.24■■□□□ 1.95
IRF3-227ENST00000600911 JAKMIP1Q96N16 626 aaKnown RBP27.24■■□□□ 1.95
IRF3-227ENST00000600911 TEPSINQ96N21 525 aa27.24■■□□□ 1.95
IRF3-227ENST00000600911 ANAPC15P60006 121 aa27.23■■□□□ 1.95
IRF3-227ENST00000600911 PRAMEF18Q5VWM3 479 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms