RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ESYT1Q9BSJ8 1104 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 DEFB129Q9H1M3 183 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 MKRN1Q9UHC7 482 aaKnown RBP24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 RAD50Q92878 1312 aa24.02■■□□□ 1.44
SHKBP1-222ENST00000600320 GSG1L2A8MUP6 293 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 SGSM2O43147 1006 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 NPM3O75607 178 aaKnown RBP24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 PRAMEF18Q5VWM3 479 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 SH3BP5LQ7L8J4 393 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 SULF1Q8IWU6 871 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 RUFY2Q8WXA3 655 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 TMEM39BQ9GZU3 492 aa24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 OSBPL5Q9H0X9 879 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 EPB41L4AQ9HCS5 686 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-222ENST00000600320 FMR1Q06787 632 aaKnown RBP eCLIP24■■□□□ 1.43
SHKBP1-222ENST00000600320 TNFAIP1Q13829 316 aa24■■□□□ 1.43
SHKBP1-222ENST00000600320 CDC37L1Q7L3B6 337 aa24■■□□□ 1.43
SHKBP1-222ENST00000600320 FAM151AQ8WW52 585 aa24■■□□□ 1.43
SHKBP1-222ENST00000600320 DCP1AQ9NPI6 582 aaPredicted RBP24■■□□□ 1.43
SHKBP1-222ENST00000600320 SAP30BPQ9UHR5 308 aaKnown RBP24■■□□□ 1.43
SHKBP1-222ENST00000600320 NAV1Q8NEY1 1877 aa23.99■■□□□ 1.43
SHKBP1-222ENST00000600320 TRAF5O00463 557 aa23.99■■□□□ 1.43
SHKBP1-222ENST00000600320 TNNI2P48788 182 aa23.99■■□□□ 1.43
SHKBP1-222ENST00000600320 TEPSINQ96N21 525 aa23.99■■□□□ 1.43
SHKBP1-222ENST00000600320 DDX60LQ5H9U9 1706 aaKnown RBP23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 DDTLA6NHG4 134 aaPredicted RBP23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 PATL2C9JE40 543 aaKnown RBP23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 TOMM70O94826 608 aa23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 GNAT2P19087 354 aa23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 ATP8A2Q9NTI2 1148 aa23.98■■□□□ 1.43
SHKBP1-222ENST00000600320 ITGBL1O95965 494 aaPredicted RBP23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 HSPD1P10809 573 aaKnown RBP23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 EVX2Q03828 476 aa23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 RBM46Q8TBY0 533 aaKnown RBP23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 PPP2R3BQ9Y5P8 575 aa23.97■■□□□ 1.43
SHKBP1-222ENST00000600320 BAZ2AQ9UIF9 1905 aaKnown RBP23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 ATRNL1Q5VV63 1379 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 RPAP1Q9BWH6 1393 aaPredicted RBP23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 APPP05067 770 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 CYP2D6P10635 497 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 SLC4A8Q2Y0W8 1093 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 NBPF12Q5TAG4 269 aaPredicted RBP23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 CASC1Q6TDU7 716 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 IFNL3Q8IZI9 196 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 SMC1BQ8NDV3 1235 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 MCM9Q9NXL9 1143 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 PALD1Q9ULE6 856 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 MYH1P12882 1939 aa23.96■■□□□ 1.43
SHKBP1-222ENST00000600320 SSC5DA1L4H1 1573 aa23.95■■□□□ 1.43
SHKBP1-222ENST00000600320 COL2A1P02458 1487 aaPredicted RBP23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 SMIM22K7EJ46 135 aa23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 SLURP2P0DP57 97 aa23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 PTH1RQ03431 593 aa23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 ZSCAN29Q8IWY8 852 aaPredicted RBP23.95■■□□□ 1.42
SHKBP1-222ENST00000600320 CYP2D7A0A087X1C5 515 aa23.94■■□□□ 1.42
SHKBP1-222ENST00000600320 GIMAP6Q6P9H5 292 aa23.94■■□□□ 1.42
SHKBP1-222ENST00000600320 SIPA1L1O43166 1804 aa23.94■■□□□ 1.42
SHKBP1-222ENST00000600320 USP17L12C9JPN9 530 aa23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 USP17L21D6R901 530 aa23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 TDO2P48775 406 aa23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 CTR9Q6PD62 1173 aa23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 DSCC1Q9BVC3 393 aa23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 LSG1Q9H089 658 aaKnown RBP23.93■■□□□ 1.42
SHKBP1-222ENST00000600320 PLCD1P51178 756 aa23.92■■□□□ 1.42
SHKBP1-222ENST00000600320 ALX1Q15699 326 aa23.92■■□□□ 1.42
SHKBP1-222ENST00000600320 NACAP1Q9BZK3 213 aa23.92■■□□□ 1.42
SHKBP1-222ENST00000600320 NAPBQ9H115 298 aa23.92■■□□□ 1.42
SHKBP1-222ENST00000600320 PASKQ96RG2 1323 aa23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 FGAP02671 866 aa23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 POLR3DP05423 398 aaPredicted RBP23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 C8orf34Q49A92 452 aa23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 DDRGK1Q96HY6 314 aa23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 CSRNP1Q96S65 589 aa23.91■■□□□ 1.42
SHKBP1-222ENST00000600320 SBK1Q52WX2 424 aa23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 C12orf60Q5U649 245 aa23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 DHX36Q9H2U1 1008 aaKnown RBP23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 ANO2Q9NQ90 1003 aa23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 ARPP21Q9UBL0 812 aaPredicted RBP23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 FZD1Q9UP38 647 aa23.9■■□□□ 1.42
SHKBP1-222ENST00000600320 FAM196BA6NMK8 535 aa23.89■■□□□ 1.41
SHKBP1-222ENST00000600320 FSTL1Q12841 308 aa23.89■■□□□ 1.41
SHKBP1-222ENST00000600320 MIGA2Q7L4E1 593 aa23.89■■□□□ 1.41
SHKBP1-222ENST00000600320 TTC6Q86TZ1 520 aa23.89■■□□□ 1.41
SHKBP1-222ENST00000600320 ZNF408Q9H9D4 720 aa23.89■■□□□ 1.41
SHKBP1-222ENST00000600320 ZMYM6O95789 1325 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 MINDY4BA8MYZ0 360 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 SUPT20HL1Q3ZLR7 823 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 KIAA1211Q6ZU35 1233 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 DNAJC18Q9H819 358 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 PI4KBQ9UBF8 816 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 LAMB1P07942 1786 aa23.88■■□□□ 1.41
SHKBP1-222ENST00000600320 HLA-DOAP06340 250 aa23.87■■□□□ 1.41
SHKBP1-222ENST00000600320 PRKG1Q13976 671 aa23.87■■□□□ 1.41
SHKBP1-222ENST00000600320 MAP4K1Q92918 833 aa23.87■■□□□ 1.41
SHKBP1-222ENST00000600320 DYNLL2Q96FJ2 89 aa23.87■■□□□ 1.41
SHKBP1-222ENST00000600320 CELF2O95319 508 aaKnown RBP23.86■■□□□ 1.41
SHKBP1-222ENST00000600320 GABPAQ06546 454 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms