RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 WBP1LQ9NX94 342 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 PPP1R12BO60237 982 aaPredicted RBP23.77■■□□□ 1.4
SHKBP1-214ENST00000597396 PLEKHM2Q8IWE5 1019 aa23.77■■□□□ 1.4
SHKBP1-214ENST00000597396 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
SHKBP1-214ENST00000597396 MAGEB6P1A0A0J9YX57 407 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 GRM1Q13255 1194 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 LRRFIP1Q32MZ4 808 aaKnown RBP23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 MOB2Q70IA6 237 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 ZSCAN29Q8IWY8 852 aaPredicted RBP23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 HOOK2Q96ED9 719 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 CCDC136Q96JN2 1154 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 DDX4Q9NQI0 724 aaKnown RBP23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 ANGEL1Q9UNK9 670 aaKnown RBP23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 OTOFQ9HC10 1997 aa23.76■■□□□ 1.39
SHKBP1-214ENST00000597396 NAV1Q8NEY1 1877 aa23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 TCRBV5S4A2TA0A5A2 114 aa23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 UBE3CQ15386 1083 aa23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 CENPQQ7L2Z9 268 aaPredicted RBP23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 FSD1Q9BTV5 496 aa23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 PRDM10Q9NQV6 1147 aa23.75■■□□□ 1.39
SHKBP1-214ENST00000597396 UBE2Q2LH0YL09 131 aa23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 MAP2K1Q02750 393 aaPredicted RBP23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 ZFPM1Q8IX07 1006 aa23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 TGFBRAP1Q8WUH2 860 aa23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 CAPNS2Q96L46 248 aa23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 FZD1Q9UP38 647 aa23.74■■□□□ 1.39
SHKBP1-214ENST00000597396 ECE1P42892 770 aa23.73■■□□□ 1.39
SHKBP1-214ENST00000597396 SLFNL1Q499Z3 407 aa23.73■■□□□ 1.39
SHKBP1-214ENST00000597396 CYP4F22Q6NT55 531 aa23.73■■□□□ 1.39
SHKBP1-214ENST00000597396 HHIPL1Q96JK4 782 aa23.73■■□□□ 1.39
SHKBP1-214ENST00000597396 OSBPL3Q9H4L5 887 aa23.73■■□□□ 1.39
SHKBP1-214ENST00000597396 ZFYP08048 801 aaPredicted RBP23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 PDE4AP27815 886 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 USP5P45974 858 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 IREB2P48200 963 aaKnown RBP23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 LBX1P52954 281 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 DCAF15Q66K64 600 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 MAPKAPK5Q8IW41 473 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 EVI5LQ96CN4 794 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 RIOK1Q9BRS2 568 aaKnown RBP23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 OSBPL5Q9H0X9 879 aaPredicted RBP23.72■■□□□ 1.39
SHKBP1-214ENST00000597396 COL2A1P02458 1487 aaPredicted RBP23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 TRIM6-TRIM34B2RNG4 842 aa23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 RNF113AO15541 343 aaKnown RBP23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 USP2O75604 605 aaPredicted RBP23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 CHGBP05060 677 aa23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 RGMBQ6NW40 437 aa23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 CRNKL1Q9BZJ0 848 aaKnown RBP23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 BAZ2AQ9UIF9 1905 aaKnown RBP23.71■■□□□ 1.39
SHKBP1-214ENST00000597396 FLT1P17948 1338 aa23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 MBD4O95243 580 aa23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 ZNF157P51786 506 aaPredicted RBP23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 MAP3K11Q16584 847 aa23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 ARMT1Q9H993 441 aa23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.7■■□□□ 1.38
SHKBP1-214ENST00000597396 ATRNL1Q5VV63 1379 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 DDTLA6NHG4 134 aaPredicted RBP23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 ERICH6BQ5W0A0 696 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 MIGA2Q7L4E1 593 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 SH3BP5LQ7L8J4 393 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 LCORLQ8N3X6 602 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 APPBP2Q92624 585 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 RILPL2Q969X0 211 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 ZNF341Q9BYN7 854 aa23.69■■□□□ 1.38
SHKBP1-214ENST00000597396 HSPA8P11142 646 aaKnown RBP23.68■■□□□ 1.38
SHKBP1-214ENST00000597396 BEGAINQ9BUH8 593 aa23.68■■□□□ 1.38
SHKBP1-214ENST00000597396 PUS7LQ9H0K6 701 aaKnown RBP23.68■■□□□ 1.38
SHKBP1-214ENST00000597396 SIPA1L1O43166 1804 aa23.68■■□□□ 1.38
SHKBP1-214ENST00000597396 LDLRAD1Q5T700 205 aa23.67■■□□□ 1.38
SHKBP1-214ENST00000597396 ANKRD13AQ8IZ07 590 aa23.67■■□□□ 1.38
SHKBP1-214ENST00000597396 DHX36Q9H2U1 1008 aaKnown RBP23.67■■□□□ 1.38
SHKBP1-214ENST00000597396 SAP30BPQ9UHR5 308 aaKnown RBP23.67■■□□□ 1.38
SHKBP1-214ENST00000597396 DDX60LQ5H9U9 1706 aaKnown RBP23.67■■□□□ 1.38
SHKBP1-214ENST00000597396 CCDC102AQ96A19 550 aa23.66■■□□□ 1.38
SHKBP1-214ENST00000597396 WRNIP1Q96S55 665 aa23.66■■□□□ 1.38
SHKBP1-214ENST00000597396 UNCXA6NJT0 531 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 AOC2O75106 756 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 MAP3K9P80192 1104 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 SDR42E1Q8WUS8 393 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 OSBP2Q969R2 916 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 SLC10A4Q96EP9 437 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 PPP4R2Q9NY27 417 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 PALD1Q9ULE6 856 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 CSADQ9Y600 493 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 ATAD5Q96QE3 1844 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 MYH8P13535 1937 aa23.65■■□□□ 1.38
SHKBP1-214ENST00000597396 THSD7BQ9C0I4 1608 aa23.64■■□□□ 1.38
SHKBP1-214ENST00000597396 HLA-DOAP06340 250 aa23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 TTC22Q5TAA0 569 aa23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 RASAL3Q86YV0 1011 aa23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 CLMNQ96JQ2 1002 aa23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 PI4KBQ9UBF8 816 aa23.64■■□□□ 1.37
SHKBP1-214ENST00000597396 SLC10A3P09131 477 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 DOCK1Q14185 1865 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 SLC4A8Q2Y0W8 1093 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 ZMYM1Q5SVZ6 1142 aa23.63■■□□□ 1.37
SHKBP1-214ENST00000597396 DDRGK1Q96HY6 314 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms