RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 IGSF3O75054 1194 aa22.58■■□□□ 1.21
SHKBP1-202ENST00000593764 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
SHKBP1-202ENST00000593764 MAP4K4O95819 1239 aaPredicted RBP22.58■■□□□ 1.21
SHKBP1-202ENST00000593764 PICALMQ13492 652 aa22.58■■□□□ 1.21
SHKBP1-202ENST00000593764 MS4A4AQ96JQ5 239 aa22.58■■□□□ 1.21
SHKBP1-202ENST00000593764 TBC1D8O95759 1140 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 IFIT2P09913 472 aaKnown RBP22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 INPP5BP32019 993 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 PPP4CP60510 307 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 MAP3K10Q02779 954 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 IFNL1Q8IU54 200 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
SHKBP1-202ENST00000593764 LAMB1P07942 1786 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 TESPA1A2RU30 521 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 SPDYE5A6NIY4 337 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 IGF2BP3O00425 579 aaKnown RBP eCLIP22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 SH3RF3Q8TEJ3 882 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 PTPN18Q99952 460 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 R3HDMLQ9H3Y0 253 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
SHKBP1-202ENST00000593764 PHF20L1A8MW92 1017 aa22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 IDH1O75874 414 aaKnown RBP22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 SLURP2P0DP57 97 aa22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 CFHR5Q9BXR6 569 aa22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 LRRCC1Q9C099 1032 aa22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 AATFQ9NY61 560 aaKnown RBP eCLIP22.55■■□□□ 1.2
SHKBP1-202ENST00000593764 SMARCA5O60264 1052 aaPredicted RBP22.54■■□□□ 1.2
SHKBP1-202ENST00000593764 BAG3O95817 575 aa22.54■■□□□ 1.2
SHKBP1-202ENST00000593764 ERO1BQ86YB8 467 aa22.54■■□□□ 1.2
SHKBP1-202ENST00000593764 TEX11Q8IYF3 940 aa22.54■■□□□ 1.2
SHKBP1-202ENST00000593764 OTUD5Q96G74 571 aa22.54■■□□□ 1.2
SHKBP1-202ENST00000593764 MAST2Q6P0Q8 1798 aa22.53■■□□□ 1.2
SHKBP1-202ENST00000593764 CYP7A1P22680 504 aa22.53■■□□□ 1.2
SHKBP1-202ENST00000593764 CRBNQ96SW2 442 aa22.53■■□□□ 1.2
SHKBP1-202ENST00000593764 NOL10Q9BSC4 688 aaKnown RBP22.53■■□□□ 1.2
SHKBP1-202ENST00000593764 OSBPL5Q9H0X9 879 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-202ENST00000593764 IRF6O14896 467 aa22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 ALDH1A1P00352 501 aa22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 PLCG2P16885 1265 aa22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 MAGEB6Q8N7X4 407 aa22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 BRI3BPQ8WY22 251 aa22.52■■□□□ 1.2
SHKBP1-202ENST00000593764 ATP5JP18859 108 aa22.51■■□□□ 1.19
SHKBP1-202ENST00000593764 GTF2A2P52657 109 aa22.51■■□□□ 1.19
SHKBP1-202ENST00000593764 DYNLL1P63167 89 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-202ENST00000593764 MAP3K12Q12852 859 aa22.51■■□□□ 1.19
SHKBP1-202ENST00000593764 NOM1Q5C9Z4 860 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-202ENST00000593764 DOCK2Q92608 1830 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 COL2A1P02458 1487 aaPredicted RBP22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 GPR25O00155 361 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 TBC1D12O60347 775 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 PPATQ06203 517 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 PPIL2Q13356 520 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 TTF1Q15361 905 aaPredicted RBP22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 TGFBRAP1Q8WUH2 860 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 ZNF296Q8WUU4 475 aaPredicted RBP22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 EDC3Q96F86 508 aaKnown RBP22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 BOLA2Q9H3K6 86 aa22.5■■□□□ 1.19
SHKBP1-202ENST00000593764 CCL15-CCL14A0A0B4J2E2 113 aa22.49■■□□□ 1.19
SHKBP1-202ENST00000593764 GOLIM4O00461 696 aa22.49■■□□□ 1.19
SHKBP1-202ENST00000593764 CCL15Q16663 113 aa22.49■■□□□ 1.19
SHKBP1-202ENST00000593764 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-202ENST00000593764 DNAJC2Q99543 621 aaKnown RBP22.49■■□□□ 1.19
SHKBP1-202ENST00000593764 OTUD7BQ6GQQ9 843 aa22.48■■□□□ 1.19
SHKBP1-202ENST00000593764 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
SHKBP1-202ENST00000593764 HAUS7Q99871 368 aa22.48■■□□□ 1.19
SHKBP1-202ENST00000593764 MCOLN1Q9GZU1 580 aa22.48■■□□□ 1.19
SHKBP1-202ENST00000593764 FAM196BA6NMK8 535 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 SNAPC2Q13487 334 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 MAPKAPK5Q8IW41 473 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 SCYL3Q8IZE3 742 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 KCNH4Q9UQ05 1017 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 FLT1P17948 1338 aa22.47■■□□□ 1.19
SHKBP1-202ENST00000593764 CDK5RAP2Q96SN8 1893 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 CTNND1O60716 968 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 CETPP11597 493 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 PDE6AP16499 860 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 CRHR2Q13324 411 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 DGKZQ13574 1117 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 SLC9C2Q5TAH2 1124 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 FAM43AQ8N2R8 423 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 ABHD8Q96I13 439 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 DHX36Q9H2U1 1008 aaKnown RBP22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 PAG1Q9NWQ8 432 aa22.46■■□□□ 1.19
SHKBP1-202ENST00000593764 TCRBV5S4A2TA0A5A2 114 aa22.45■■□□□ 1.18
SHKBP1-202ENST00000593764 PTPRAP18433 802 aa22.45■■□□□ 1.18
SHKBP1-202ENST00000593764 CERS3Q8IU89 383 aa22.45■■□□□ 1.18
SHKBP1-202ENST00000593764 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-202ENST00000593764 PI4KBQ9UBF8 816 aa22.45■■□□□ 1.18
SHKBP1-202ENST00000593764 BTBD19C9JJ37 291 aa22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 CAPN15O75808 1086 aa22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 MOGSQ13724 837 aa22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 RRP1BQ14684 758 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 METTL16Q86W50 562 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
SHKBP1-202ENST00000593764 FOCADQ5VW36 1801 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms