RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 ENTPD3O75355 529 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 SLC10A3P09131 477 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 ADD2P35612 726 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 TNNI2P48788 182 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 MAP3K12Q12852 859 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 PICALMQ13492 652 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
H3F3B-212ENST00000592643 SUPT20HL1Q3ZLR7 823 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
H3F3B-212ENST00000592643 MIGA2Q7L4E1 593 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.4□□□□□ -0.15e-10■□□□□ 10.1
H3F3B-212ENST00000592643 TMOD2Q9NZR1 351 aa14.4□□□□□ -0.1
H3F3B-212ENST00000592643 GJA5P36382 358 aa14.39□□□□□ -0.11
H3F3B-212ENST00000592643 MAP3K10Q02779 954 aa14.39□□□□□ -0.11
H3F3B-212ENST00000592643 PLEKHM2Q8IWE5 1019 aa14.39□□□□□ -0.11
H3F3B-212ENST00000592643 TEX11Q8IYF3 940 aa14.39□□□□□ -0.11
H3F3B-212ENST00000592643 OSBPL5Q9H0X9 879 aaPredicted RBP14.39□□□□□ -0.11
H3F3B-212ENST00000592643 FLT1P17948 1338 aa14.39□□□□□ -0.11
H3F3B-212ENST00000592643 PHF20L1A8MW92 1017 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 NF2P35240 595 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
H3F3B-212ENST00000592643 EVX2Q03828 476 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 GRM1Q13255 1194 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 TGFBRAP1Q8WUH2 860 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 ZNF112Q9UJU3 913 aa14.38□□□□□ -0.11
H3F3B-212ENST00000592643 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
H3F3B-212ENST00000592643 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
H3F3B-212ENST00000592643 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
H3F3B-212ENST00000592643 ARMC9Q7Z3E5 817 aa14.37□□□□□ -0.11
H3F3B-212ENST00000592643 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
H3F3B-212ENST00000592643 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
H3F3B-212ENST00000592643 DNAJC18Q9H819 358 aa14.37□□□□□ -0.11
H3F3B-212ENST00000592643 COL2A1P02458 1487 aaPredicted RBP14.37□□□□□ -0.11
H3F3B-212ENST00000592643 FAM196BA6NMK8 535 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 PRKAB2O43741 272 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 PPP1R12BO60237 982 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-212ENST00000592643 BAG3O95817 575 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 INPP5BP32019 993 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 VGLL4Q14135 290 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 TMED8Q6PL24 325 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-212ENST00000592643 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-212ENST00000592643 ZKSCAN4Q969J2 545 aaPredicted RBP14.36□□□□□ -0.11
H3F3B-212ENST00000592643 OSBP2Q969R2 916 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 CSRNP1Q96S65 589 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 WBP1LQ9NX94 342 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 OTOFQ9HC10 1997 aa14.36□□□□□ -0.11
H3F3B-212ENST00000592643 MAGEB6P1A0A0J9YX57 407 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 MAP2K2P36507 400 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 ECE1P42892 770 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 JAG1P78504 1218 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 KIF23Q02241 960 aaPredicted RBP14.35□□□□□ -0.11
H3F3B-212ENST00000592643 SPRYD7Q5W111 196 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 METTL16Q86W50 562 aaKnown RBP14.35□□□□□ -0.11
H3F3B-212ENST00000592643 SKAP1Q86WV1 359 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 SIPA1L1O43166 1804 aa14.35□□□□□ -0.11
H3F3B-212ENST00000592643 UNCXA6NJT0 531 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 ERC2O15083 957 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 MBD4O95243 580 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 PLCG2P16885 1265 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 IREB2P48200 963 aaKnown RBP14.34□□□□□ -0.11
H3F3B-212ENST00000592643 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
H3F3B-212ENST00000592643 NOGQ13253 232 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
H3F3B-212ENST00000592643 ANKRD13AQ8IZ07 590 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 WRNIP1Q96S55 665 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 SEC62Q99442 399 aaKnown RBP14.34□□□□□ -0.11
H3F3B-212ENST00000592643 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
H3F3B-212ENST00000592643 SAP30BPQ9UHR5 308 aaKnown RBP14.34□□□□□ -0.11
H3F3B-212ENST00000592643 CDK5RAP2Q96SN8 1893 aa14.33□□□□□ -0.11
H3F3B-212ENST00000592643 DDX60LQ5H9U9 1706 aaKnown RBP14.33□□□□□ -0.12
H3F3B-212ENST00000592643 M0R2C6 588 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 FOXP2O15409 715 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 RNF113AO15541 343 aaKnown RBP14.33□□□□□ -0.12
H3F3B-212ENST00000592643 TBC1D12O60347 775 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 WNK4Q96J92 1243 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 ZNF341Q9BYN7 854 aa14.33□□□□□ -0.12
H3F3B-212ENST00000592643 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.33□□□□□ -0.12
H3F3B-212ENST00000592643 FOCADQ5VW36 1801 aa14.32□□□□□ -0.12
H3F3B-212ENST00000592643 HSPA1AP0DMV8 641 aaKnown RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 HSPA1BP0DMV9 641 aaKnown RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 GSPT1P15170 499 aaKnown RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 PLCD1P51178 756 aa14.32□□□□□ -0.12
H3F3B-212ENST00000592643 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 SLC10A4Q96EP9 437 aa14.32□□□□□ -0.12
H3F3B-212ENST00000592643 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
H3F3B-212ENST00000592643 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 NOL10Q9BSC4 688 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 524.3 ms