RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
PTBP1-216ENST00000590887 DIXDC1Q155Q3 683 aa15.3■□□□□ 0.04
PTBP1-216ENST00000590887 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
PTBP1-216ENST00000590887 NOL8Q76FK4 1167 aaKnown RBP15.3■□□□□ 0.04
PTBP1-216ENST00000590887 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
PTBP1-216ENST00000590887 KIF3AQ9Y496 699 aa15.3■□□□□ 0.04
PTBP1-216ENST00000590887 USP17L12C9JPN9 530 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 USP17L21D6R901 530 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 CPA1P15085 419 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 CRKP46108 304 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■□□□□ 10
PTBP1-216ENST00000590887 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-216ENST00000590887 CTR9Q6PD62 1173 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 TTC6Q86TZ1 520 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 MB21D2Q8IYB1 491 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-216ENST00000590887 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 SH3RF3Q8TEJ3 882 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-216ENST00000590887 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 ZDHHC15Q96MV8 337 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
PTBP1-216ENST00000590887 SMC3Q9UQE7 1217 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 DAGLAQ9Y4D2 1042 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 PSME4Q14997 1843 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
PTBP1-216ENST00000590887 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
PTBP1-216ENST00000590887 EIF6P56537 245 aaKnown RBP15.28■□□□□ 0.04
PTBP1-216ENST00000590887 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 BRF1Q92994 677 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 UBAC1Q9BSL1 405 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 TIAM2Q8IVF5 1701 aa15.28■□□□□ 0.04
PTBP1-216ENST00000590887 B4E1Z4 1266 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 ORC4O43929 436 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 LIFRP42702 1097 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 GRIK5Q16478 980 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 RRP12Q5JTH9 1297 aaKnown RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 CIAPIN1Q6FI81 312 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 CERS5Q8N5B7 392 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 NLGN2Q8NFZ4 835 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 LLPHQ9BRT6 129 aaKnown RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 MKNK2Q9HBH9 465 aa15.27■□□□□ 0.04
PTBP1-216ENST00000590887 ANGEL1Q9UNK9 670 aaKnown RBP15.27■□□□□ 0.04
PTBP1-216ENST00000590887 BAZ2AQ9UIF9 1905 aaKnown RBP15.26■□□□□ 0.03
PTBP1-216ENST00000590887 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 HLA-DOAP06340 250 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 FGRP09769 529 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 PDCP20941 246 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
PTBP1-216ENST00000590887 EVCP57679 992 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 NFXL1Q6ZNB6 911 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 ZNF444Q8N0Y2 327 aaPredicted RBP15.26■□□□□ 0.03
PTBP1-216ENST00000590887 TPCN1Q9ULQ1 816 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 TAF6LQ9Y6J9 622 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 NAV1Q8NEY1 1877 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 LAMB1P07942 1786 aa15.26■□□□□ 0.03
PTBP1-216ENST00000590887 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 MYO1BO43795 1136 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 PFKFB2O60825 505 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 KDM4AO75164 1064 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 SCNN1DP51172 638 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 RHBDL3P58872 404 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 HMGN5P82970 282 aaKnown RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 WTAPQ15007 396 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 PPP2R5BQ15173 497 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 ME3Q16798 604 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 TMEM67Q5HYA8 995 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 TCEANC2Q96MN5 208 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 DHX36Q9H2U1 1008 aaKnown RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 ZSWIM5Q9P217 1185 aa15.25■□□□□ 0.03
PTBP1-216ENST00000590887 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
PTBP1-216ENST00000590887 YDJCA8MPS7 323 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 CDKL5O76039 1030 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 YY1P25490 414 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 RCAN1P53805 252 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 DLGAP5Q15398 846 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 CCDC83Q8IWF9 413 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 SWAP70Q9UH65 585 aa15.24■□□□□ 0.03
PTBP1-216ENST00000590887 MYH1P12882 1939 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 FLT1P17948 1338 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 NEDD4P46934 1319 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 FOCADQ5VW36 1801 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 PSMD14O00487 310 aa15.23■□□□□ 0.03
PTBP1-216ENST00000590887 SH2B2O14492 632 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms