RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CCDC8Q9H0W5 538 aaPredicted RBP20.77■□□□□ 0.92
CROCCP3-203ENST00000589964 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.92
CROCCP3-203ENST00000589964 EXOC6BQ9Y2D4 811 aa20.77■□□□□ 0.92
CROCCP3-203ENST00000589964 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
CROCCP3-203ENST00000589964 GPR75-ASB3A0A0A6YYF3 556 aa20.76■□□□□ 0.91
CROCCP3-203ENST00000589964 ALDH1A1P00352 501 aa20.76■□□□□ 0.91
CROCCP3-203ENST00000589964 OS9Q13438 667 aaPredicted RBP20.76■□□□□ 0.91
CROCCP3-203ENST00000589964 ERICH6Q7L0X2 663 aa20.76■□□□□ 0.91
CROCCP3-203ENST00000589964 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
CROCCP3-203ENST00000589964 ECM2O94769 699 aaPredicted RBP20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 CYP2E1P05181 493 aaPredicted RBP20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 ZAP70P43403 619 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 GTF2A2P52657 109 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 PPIL2Q13356 520 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 RRP1BQ14684 758 aaKnown RBP20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 DCAF15Q66K64 600 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 ARHGAP39Q9C0H5 1083 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 COG6Q9Y2V7 657 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 TRIM17Q9Y577 477 aa20.75■□□□□ 0.91
CROCCP3-203ENST00000589964 TAF1CQ15572 869 aaPredicted RBP20.74■□□□□ 0.91
CROCCP3-203ENST00000589964 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
CROCCP3-203ENST00000589964 RAI14Q9P0K7 980 aa20.74■□□□□ 0.91
CROCCP3-203ENST00000589964 ENTPD3O75355 529 aa20.73■□□□□ 0.91
CROCCP3-203ENST00000589964 FBXO46Q6PJ61 603 aaPredicted RBP20.73■□□□□ 0.91
CROCCP3-203ENST00000589964 SH3RF3Q8TEJ3 882 aaPredicted RBP20.73■□□□□ 0.91
CROCCP3-203ENST00000589964 GPR108Q9NPR9 543 aa20.73■□□□□ 0.91
CROCCP3-203ENST00000589964 SIPA1L1O43166 1804 aa20.73■□□□□ 0.91
CROCCP3-203ENST00000589964 CTGFP29279 349 aa20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 NOL9Q5SY16 702 aaKnown RBP20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 CENPFP49454 3210 aa20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 MAST2Q6P0Q8 1798 aa20.72■□□□□ 0.91
CROCCP3-203ENST00000589964 MLLT1Q03111 559 aaPredicted RBP20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 SNAPC2Q13487 334 aa20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 ZSCAN29Q8IWY8 852 aaPredicted RBP20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 ANTXR1Q9H6X2 564 aa20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 IL1RAPL2Q9NP60 686 aa20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
CROCCP3-203ENST00000589964 PHIPQ8WWQ0 1821 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 CETPP11597 493 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 SP3Q02447 781 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 MAP3K10Q02779 954 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 GPAT2Q6NUI2 795 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 ADGRA2Q96PE1 1338 aa20.7■□□□□ 0.9
CROCCP3-203ENST00000589964 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 APBB1O00213 710 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 DYNLL1P63167 89 aaKnown RBP20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 JAG1P78504 1218 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 PPATQ06203 517 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 PKN2Q16513 984 aaKnown RBP20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 AATFQ9NY61 560 aaKnown RBP eCLIP20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
CROCCP3-203ENST00000589964 PTPRAP18433 802 aa20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 OTUD7BQ6GQQ9 843 aa20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 OSBPL5Q9H0X9 879 aaPredicted RBP20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 ZBTB40Q9NUA8 1239 aa20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 CPA4Q9UI42 421 aa20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 DOCK1Q14185 1865 aa20.68■□□□□ 0.9
CROCCP3-203ENST00000589964 POTEFA5A3E0 1075 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 SLC4A8Q2Y0W8 1093 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 AACSQ86V21 672 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 TEX11Q8IYF3 940 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 SCYL3Q8IZE3 742 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 ZFYVE28Q9HCC9 887 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 PTPN22Q9Y2R2 807 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 ZHX2Q9Y6X8 837 aa20.67■□□□□ 0.9
CROCCP3-203ENST00000589964 PTPRFP10586 1907 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 PDHXO00330 501 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 NAA16Q6N069 864 aaPredicted RBP20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 SLF2Q8IX21 1173 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 ERO1AQ96HE7 468 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 EFCC1Q9HA90 598 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 PTCH2Q9Y6C5 1203 aa20.66■□□□□ 0.9
CROCCP3-203ENST00000589964 TLR2O60603 784 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 CYP2C8P10632 490 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 GSTO1P78417 241 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 CCDC158Q5M9N0 1113 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 MAPKAPK5Q8IW41 473 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 EDC3Q96F86 508 aaKnown RBP20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 ZNF512BQ96KM6 892 aaPredicted RBP20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 AFG3L2Q9Y4W6 797 aa20.65■□□□□ 0.9
CROCCP3-203ENST00000589964 EVX2Q03828 476 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 SLFNL1Q499Z3 407 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 C17orf99Q6UX52 265 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 MIGA1Q8NAN2 632 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 RHPN1Q8TCX5 695 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 TGFBRAP1Q8WUH2 860 aa20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 SAP30BPQ9UHR5 308 aaKnown RBP20.64■□□□□ 0.89
CROCCP3-203ENST00000589964 COL2A1P02458 1487 aaPredicted RBP20.63■□□□□ 0.89
CROCCP3-203ENST00000589964 FLT1P17948 1338 aa20.63■□□□□ 0.89
CROCCP3-203ENST00000589964 BRCA2P51587 3418 aa20.63■□□□□ 0.89
CROCCP3-203ENST00000589964 TRIM75PA6NK02 468 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms