RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 CXCL11O14625 94 aa15.05■□□□□ -0
VAT1-206ENST00000589709 ZBTB7BO15156 539 aaPredicted RBP15.05■□□□□ -0
VAT1-206ENST00000589709 RHBDL3P58872 404 aa15.05■□□□□ -0
VAT1-206ENST00000589709 SH3BP5LQ7L8J4 393 aa15.05■□□□□ -0
VAT1-206ENST00000589709 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.05■□□□□ -0
VAT1-206ENST00000589709 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
VAT1-206ENST00000589709 MYH2Q9UKX2 1941 aa15.05■□□□□ -0
VAT1-206ENST00000589709 IGSF3O75054 1194 aa15.04■□□□□ -0
VAT1-206ENST00000589709 MOGSQ13724 837 aa15.04■□□□□ -0
VAT1-206ENST00000589709 PI16Q6UXB8 463 aa15.04■□□□□ -0
VAT1-206ENST00000589709 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
VAT1-206ENST00000589709 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
VAT1-206ENST00000589709 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
VAT1-206ENST00000589709 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
VAT1-206ENST00000589709 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
VAT1-206ENST00000589709 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
VAT1-206ENST00000589709 TBC1D12O60347 775 aa15.03■□□□□ -0
VAT1-206ENST00000589709 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
VAT1-206ENST00000589709 GNRH1P01148 92 aa15.03■□□□□ -0
VAT1-206ENST00000589709 MCAMP43121 646 aa15.03■□□□□ -0
VAT1-206ENST00000589709 TNNI3KQ59H18 835 aa15.03■□□□□ -0
VAT1-206ENST00000589709 C17orf99Q6UX52 265 aa15.03■□□□□ -0
VAT1-206ENST00000589709 ZSCAN29Q8IWY8 852 aaPredicted RBP15.03■□□□□ -0
VAT1-206ENST00000589709 SCYL3Q8IZE3 742 aa15.03■□□□□ -0
VAT1-206ENST00000589709 ZNF512BQ96KM6 892 aaPredicted RBP15.03■□□□□ -0
VAT1-206ENST00000589709 FPGT-TNNI3KV9GXZ4 949 aa15.03■□□□□ -0
VAT1-206ENST00000589709 AK9Q5TCS8 1911 aa15.02■□□□□ -0
VAT1-206ENST00000589709 PDHXO00330 501 aa15.02■□□□□ -0
VAT1-206ENST00000589709 CTNND1O60716 968 aaKnown RBP15.02■□□□□ -0
VAT1-206ENST00000589709 RLBP1P12271 317 aa15.02■□□□□ -0
VAT1-206ENST00000589709 PTPRAP18433 802 aa15.02■□□□□ -0
VAT1-206ENST00000589709 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
VAT1-206ENST00000589709 KIF22Q14807 665 aa15.02■□□□□ -0
VAT1-206ENST00000589709 CCDC158Q5M9N0 1113 aa15.02■□□□□ -0
VAT1-206ENST00000589709 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
VAT1-206ENST00000589709 PICK1Q9NRD5 415 aa15.02■□□□□ -0
VAT1-206ENST00000589709 RAI14Q9P0K7 980 aa15.02■□□□□ -0
VAT1-206ENST00000589709 ZHX2Q9Y6X8 837 aa15.02■□□□□ -0
VAT1-206ENST00000589709 HTTP42858 3142 aa15.02□□□□□ -0.01
VAT1-206ENST00000589709 PRMT2P55345 433 aa15.01□□□□□ -0.01
VAT1-206ENST00000589709 OS9Q13438 667 aaPredicted RBP15.01□□□□□ -0.01
VAT1-206ENST00000589709 PICALMQ13492 652 aa15.01□□□□□ -0.01
VAT1-206ENST00000589709 FASTKD5Q7L8L6 764 aaKnown RBP15.01□□□□□ -0.01
VAT1-206ENST00000589709 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
VAT1-206ENST00000589709 AFG3L2Q9Y4W6 797 aa15.01□□□□□ -0.01
VAT1-206ENST00000589709 ADGRA2Q96PE1 1338 aa15□□□□□ -0.01
VAT1-206ENST00000589709 A0A0G2JLL6 359 aaPredicted RBP15□□□□□ -0.01
VAT1-206ENST00000589709 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
VAT1-206ENST00000589709 GPAT2Q6NUI2 795 aa15□□□□□ -0.01
VAT1-206ENST00000589709 PRRT2Q7Z6L0 340 aaPredicted RBP15□□□□□ -0.01
VAT1-206ENST00000589709 NBPF11Q86T75 865 aa15□□□□□ -0.01
VAT1-206ENST00000589709 ZNF333Q96JL9 665 aa15□□□□□ -0.01
VAT1-206ENST00000589709 DBNDD2Q9BQY9 259 aa15□□□□□ -0.01
VAT1-206ENST00000589709 C1orf115Q9H7X2 142 aa15□□□□□ -0.01
VAT1-206ENST00000589709 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
VAT1-206ENST00000589709 COL2A1P02458 1487 aaPredicted RBP15□□□□□ -0.01
VAT1-206ENST00000589709 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 BAG3O95817 575 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 PPP4CP60510 307 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 PRPF38BQ5VTL8 546 aaKnown RBP14.99□□□□□ -0.01
VAT1-206ENST00000589709 PARK7Q99497 189 aaKnown RBP14.99□□□□□ -0.01
VAT1-206ENST00000589709 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
VAT1-206ENST00000589709 SNRKQ9NRH2 765 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 CPA4Q9UI42 421 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
VAT1-206ENST00000589709 KIAA0100Q14667 2235 aaKnown RBP14.98□□□□□ -0.01
VAT1-206ENST00000589709 CYP2E1P05181 493 aaPredicted RBP14.98□□□□□ -0.01
VAT1-206ENST00000589709 SLURP2P0DP57 97 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 MS4A1P11836 297 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 PLCG2P16885 1265 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 SLC9C1Q4G0N8 1177 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 NAA16Q6N069 864 aaPredicted RBP14.98□□□□□ -0.01
VAT1-206ENST00000589709 TEX11Q8IYF3 940 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 NOL10Q9BSC4 688 aaKnown RBP14.98□□□□□ -0.01
VAT1-206ENST00000589709 DBNLQ9UJU6 430 aaKnown RBP14.98□□□□□ -0.01
VAT1-206ENST00000589709 DOCK2Q92608 1830 aa14.98□□□□□ -0.01
VAT1-206ENST00000589709 BCRP11274 1271 aa14.97□□□□□ -0.01
VAT1-206ENST00000589709 HOXD10P28358 340 aa14.97□□□□□ -0.01
VAT1-206ENST00000589709 PSMC4P43686 418 aa14.97□□□□□ -0.01
VAT1-206ENST00000589709 CEP85Q6P2H3 762 aa14.97□□□□□ -0.01
VAT1-206ENST00000589709 EAF2Q96CJ1 260 aaPredicted RBP14.97□□□□□ -0.01
VAT1-206ENST00000589709 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
VAT1-206ENST00000589709 DHX36Q9H2U1 1008 aaKnown RBP14.97□□□□□ -0.01
VAT1-206ENST00000589709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.97□□□□□ -0.01
VAT1-206ENST00000589709 HERC5Q9UII4 1024 aaKnown RBP14.97□□□□□ -0.01
VAT1-206ENST00000589709 CTGFP29279 349 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 ERC1Q8IUD2 1116 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 SH3RF3Q8TEJ3 882 aaPredicted RBP14.96□□□□□ -0.01
VAT1-206ENST00000589709 TRIM47Q96LD4 638 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 TBC1D2Q9BYX2 928 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 PI4KBQ9UBF8 816 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 SRRDQ9UH36 339 aa14.96□□□□□ -0.01
VAT1-206ENST00000589709 SLC34A2O95436 690 aa14.95□□□□□ -0.02
VAT1-206ENST00000589709 FMNL1O95466 1100 aaPredicted RBP14.95□□□□□ -0.02
VAT1-206ENST00000589709 CYP2C8P10632 490 aa14.95□□□□□ -0.02
VAT1-206ENST00000589709 CAP2P40123 477 aa14.95□□□□□ -0.02
VAT1-206ENST00000589709 ZAP70P43403 619 aa14.95□□□□□ -0.02
VAT1-206ENST00000589709 TMED8Q6PL24 325 aaPredicted RBP14.95□□□□□ -0.02
VAT1-206ENST00000589709 FOXP4Q8IVH2 680 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms