RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 UHRF1BP1LA0JNW5 1464 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 IMPDH2P12268 514 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 RAB27AP51159 221 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 PPP4CP60510 307 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 CCDC85BQ15834 202 aaPredicted RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 ANKRD13DQ6ZTN6 518 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 CACTIN-AS1Q8N1I8 211 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 RBSNQ9H1K0 784 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 ZMYM3Q14202 1370 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 DHX29Q7Z478 1369 aaKnown RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 B2RBV5 119 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 BHMG1C9JSJ3 638 aaPredicted RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 GIPC1O14908 333 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 KIF3BO15066 747 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 SGSM2O43147 1006 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 KATNA1O75449 491 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 GABBR2O75899 941 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 NAT1P18440 290 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 BDNFP23560 247 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 USP8P40818 1118 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 NCBP1Q09161 790 aaKnown RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 GPS2Q13227 327 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 SAFB2Q14151 953 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 GRM2Q14416 872 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 CBX2Q14781 532 aaPredicted RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 SLC5A9Q2M3M2 681 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 CTC1Q2NKJ3 1217 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 MTERF2Q49AM1 385 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 LHX8Q68G74 356 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 TRMT44Q8IYL2 757 aaKnown RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 MIEF2Q96C03 454 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 SLX1AQ9BQ83 275 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 NT5C1AQ9BXI3 368 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 RMI1Q9H9A7 625 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 ENAMQ9NRM1 1142 aa6.55□□□□□ -1.36
LINC01538-201ENST00000588074 RRP15Q9Y3B9 282 aaKnown RBP6.55□□□□□ -1.36
LINC01538-201ENST00000588074 PRPF3O43395 683 aaKnown RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 CDKL5O76039 1030 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 STAT3P40763 770 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 COPS2P61201 443 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 KLHL40Q2TBA0 621 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 PPP4R4Q6NUP7 873 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 LEKR1Q6ZMV7 388 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF295-AS1Q8N0V1 137 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 DRAXINQ8NBI3 349 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF397Q8NF99 534 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 KIF2CQ99661 725 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TRAK1Q9UPV9 953 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 V9GYY5 206 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 A0A087X0B3 334 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TMCO5BA8MYB1 307 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 GREM1O60565 184 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 ATF3P18847 181 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 NUCB2P80303 420 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TRIP4Q15650 581 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 RTN1Q16799 776 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 WDR78Q5VTH9 848 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 NAIF1Q69YI7 327 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 TTC19Q6DKK2 380 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 CCDC186Q7Z3E2 898 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 LAPTM4BQ86VI4 370 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 ZNF784Q8NCA9 323 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 GOLGA5Q8TBA6 731 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 JARID2Q92833 1246 aaPredicted RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 SLC4A5Q9BY07 1137 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 ARHGEF10LQ9HCE6 1279 aa6.54□□□□□ -1.36
LINC01538-201ENST00000588074 A1CFQ9NQ94 594 aaKnown RBP6.54□□□□□ -1.36
LINC01538-201ENST00000588074 FHAD1B1AJZ9 1412 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 NCOA3Q9Y6Q9 1424 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 ERBB3P21860 1342 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 CGNL1Q0VF96 1302 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 EPB41L2O43491 1005 aaKnown RBP6.53□□□□□ -1.36
LINC01538-201ENST00000588074 IL2RAP01589 272 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 KRT18P05783 430 aaKnown RBP6.53□□□□□ -1.36
LINC01538-201ENST00000588074 POTEIP0CG38 1075 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 POTEJP0CG39 1038 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 TCEA2Q15560 299 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 LARP1BQ659C4 914 aaKnown RBP6.53□□□□□ -1.36
LINC01538-201ENST00000588074 NCAPG2Q86XI2 1143 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 RELL1Q8IUW5 271 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 CCDC191Q8NCU4 936 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 PHACTR1Q9C0D0 580 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 ZFYVE28Q9HCC9 887 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 SPATS2LQ9NUQ6 558 aaKnown RBP6.53□□□□□ -1.36
LINC01538-201ENST00000588074 UTP6Q9NYH9 597 aaKnown RBP6.53□□□□□ -1.36
LINC01538-201ENST00000588074 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 INTUQ9ULD6 942 aa6.53□□□□□ -1.36
LINC01538-201ENST00000588074 SERTM1A2A2V5 107 aa6.52□□□□□ -1.36
LINC01538-201ENST00000588074 IFRD1O00458 451 aaPredicted RBP6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms