RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 AFAP1L2Q8N4X5 818 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 SHANK2Q9UPX8 1470 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 EFCAB8A8MWE9 144 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 ETF1P62495 437 aaKnown RBP8.18□□□□□ -1.1
CDH8-214ENST00000585315 CSGALNACT2Q8N6G5 542 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 USHBP1Q8N6Y0 703 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 FAM169AQ9Y6X4 670 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
CDH8-214ENST00000585315 DKC1O60832 514 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDH8-214ENST00000585315 U2AF2P26368 475 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDH8-214ENST00000585315 PAK1Q13153 545 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 RAPGEF1Q13905 1077 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 OGFOD1Q8N543 542 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 MIPOL1Q8TD10 442 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 MCUR1Q96AQ8 359 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 APOBRQ0VD83 1088 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 TTC6Q86TZ1 520 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 SEC62Q99442 399 aaKnown RBP8.18□□□□□ -1.1
CDH8-214ENST00000585315 ANKRD2Q9GZV1 360 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 MSH6P52701 1360 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 STX10O60499 249 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 STX17P56962 302 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 VSIG1Q86XK7 387 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 APPBP2Q92624 585 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 PER1O15534 1290 aaPredicted RBP8.18□□□□□ -1.1
CDH8-214ENST00000585315 SPOPO43791 374 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 SMTNP53814 917 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
CDH8-214ENST00000585315 CNGA1P29973 690 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 NLRP12P59046 1061 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 GNA14O95837 355 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 ELF2Q15723 593 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 ZSCAN26Q16670 478 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 CCDC25Q86WR0 208 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 SAR1BQ9Y6B6 198 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 RNF40O75150 1001 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 SLC8A1P32418 973 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 ADALQ6DHV7 355 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 LMBRD1Q9NUN5 540 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 CARD6Q9BX69 1037 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 HAUS4Q9H6D7 363 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 MYO1AQ9UBC5 1043 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 UHRF1BP1LA0JNW5 1464 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 VWA3AA6NCI4 1184 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 PSMC4P43686 418 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 ST5P78524 1137 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 LIN9Q5TKA1 542 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 PEG3Q9GZU2 1588 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 TRPM2O94759 1503 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 URB2Q14146 1524 aaKnown RBP8.17□□□□□ -1.1
CDH8-214ENST00000585315 RAB11FIP4Q86YS3 637 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 KBTBD3Q8NAB2 608 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 CASQ2O14958 399 aaPredicted RBP8.17□□□□□ -1.1
CDH8-214ENST00000585315 TCP1P17987 556 aaKnown RBP8.17□□□□□ -1.1
CDH8-214ENST00000585315 MCM7P33993 719 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 MAGEA1P43355 309 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 TNNI2P48788 182 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
CDH8-214ENST00000585315 EIF4A2Q14240 407 aaKnown RBP8.17□□□□□ -1.1
CDH8-214ENST00000585315 PHLDB3Q6NSJ2 640 aa8.17□□□□□ -1.1
CDH8-214ENST00000585315 TRAPPC8Q9Y2L5 1435 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 WDR44Q5JSH3 913 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 ARMC9Q7Z3E5 817 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 SDCCAG8Q86SQ7 713 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 P3H4Q92791 437 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 MCM9Q9NXL9 1143 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 HPDP32754 393 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 MAP2K2P36507 400 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 SLC8A3P57103 927 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 OR8K1Q8NGG5 319 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 MCTP2Q6DN12 878 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 RABGGTAQ92696 567 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 ATP2A3Q93084 1043 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 ZFP91Q96JP5 570 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 BCRP11274 1271 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 RBM6P78332 1123 aaKnown RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 MAP7Q14244 749 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 IWS1Q96ST2 819 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 EXOC7Q9UPT5 735 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 EYA2O00167 538 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 BUB1BO60566 1050 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 GKAP1Q5VSY0 366 aaPredicted RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 ANKRD20A3Q5VUR7 823 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 KRT28Q7Z3Y7 464 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 ZCRB1Q8TBF4 217 aaKnown RBP8.16□□□□□ -1.1
CDH8-214ENST00000585315 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 NUF2Q9BZD4 464 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 KIAA1468Q9P260 1216 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 KIAA0232Q92628 1395 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 POSTNQ15063 836 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 RPS6KA1Q15418 735 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 TPTE2Q6XPS3 522 aa8.16□□□□□ -1.1
CDH8-214ENST00000585315 TMOD4Q9NZQ9 345 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms