RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 FAM198AQ9UFP1 575 aa17.82■□□□□ 0.44
CSNK1D-224ENST00000584672 VAMP4O75379 141 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 GPR153Q6NV75 609 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 FASTKD5Q7L8L6 764 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 TDHQ8IZJ6 230 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 ANKRD13CQ8N6S4 541 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 COA7Q96BR5 231 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 BICC1Q9H694 974 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
CSNK1D-224ENST00000584672 TRIM32Q13049 653 aa17.8■□□□□ 0.44
CSNK1D-224ENST00000584672 LRIT3Q3SXY7 679 aa17.8■□□□□ 0.44
CSNK1D-224ENST00000584672 VGLL2Q8N8G2 317 aa17.8■□□□□ 0.44
CSNK1D-224ENST00000584672 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
CSNK1D-224ENST00000584672 DOCK1Q14185 1865 aa17.8■□□□□ 0.44
CSNK1D-224ENST00000584672 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 PDE8BO95263 885 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 PTPRAP18433 802 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 SRCIN1Q9C0H9 1055 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 NBPF3Q9H094 633 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 SUGT1Q9Y2Z0 365 aa17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-224ENST00000584672 IL16Q14005 1332 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 PRDX5P30044 214 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 C11orf49Q9H6J7 331 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 AFG3L2Q9Y4W6 797 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
CSNK1D-224ENST00000584672 PHF20L1A8MW92 1017 aa17.77■□□□□ 0.44
CSNK1D-224ENST00000584672 ALDH1L1O75891 902 aa17.77■□□□□ 0.44
CSNK1D-224ENST00000584672 TREML2Q5T2D2 321 aa17.77■□□□□ 0.44
CSNK1D-224ENST00000584672 ANKLE1Q8NAG6 615 aa17.77■□□□□ 0.44
CSNK1D-224ENST00000584672 FAM161BQ96MY7 647 aa17.77■□□□□ 0.44
CSNK1D-224ENST00000584672 HMGCRP04035 888 aa17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 CAPN2P17655 700 aa17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 RGS3P49796 1198 aa17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 WDR66Q8TBY9 1149 aa17.76■□□□□ 0.43
CSNK1D-224ENST00000584672 PUM3Q15397 648 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-224ENST00000584672 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
CSNK1D-224ENST00000584672 HMX1Q9NP08 348 aaPredicted RBP17.75■□□□□ 0.43
CSNK1D-224ENST00000584672 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
CSNK1D-224ENST00000584672 LRRFIP2Q9Y608 721 aaKnown RBP17.75■□□□□ 0.43
CSNK1D-224ENST00000584672 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 FGFR2P21802 821 aa17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 MDM2Q00987 491 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 AGTPBP1Q9UPW5 1226 aa17.74■□□□□ 0.43
CSNK1D-224ENST00000584672 PFASO15067 1338 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 LDHBP07195 334 aaKnown RBP17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 SLC5A1P13866 664 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 PICALMQ13492 652 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
CSNK1D-224ENST00000584672 DDTLA6NHG4 134 aaPredicted RBP17.72■□□□□ 0.43
CSNK1D-224ENST00000584672 FAM196BA6NMK8 535 aa17.72■□□□□ 0.43
CSNK1D-224ENST00000584672 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
CSNK1D-224ENST00000584672 LOC285556D6RIA3 1793 aa17.71■□□□□ 0.43
CSNK1D-224ENST00000584672 CYP2B6P20813 491 aa17.71■□□□□ 0.43
CSNK1D-224ENST00000584672 TRIB2Q92519 343 aa17.71■□□□□ 0.43
CSNK1D-224ENST00000584672 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
CSNK1D-224ENST00000584672 KIF16BQ96L93 1317 aa17.71■□□□□ 0.42
CSNK1D-224ENST00000584672 ATAD5Q96QE3 1844 aa17.7■□□□□ 0.42
CSNK1D-224ENST00000584672 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
CSNK1D-224ENST00000584672 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
CSNK1D-224ENST00000584672 OGDHLQ9ULD0 1010 aa17.7■□□□□ 0.42
CSNK1D-224ENST00000584672 UTYO14607 1347 aa17.7■□□□□ 0.42
CSNK1D-224ENST00000584672 RFX7Q2KHR2 1363 aa17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 PEX10O60683 326 aa17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 CTNND1O60716 968 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 ENTPD3O75355 529 aa17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 LRRC26Q2I0M4 334 aa17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 LPIN2Q92539 896 aa17.69■□□□□ 0.42
CSNK1D-224ENST00000584672 HMGCS2P54868 508 aa17.68■□□□□ 0.42
CSNK1D-224ENST00000584672 SPP2Q13103 211 aa17.68■□□□□ 0.42
CSNK1D-224ENST00000584672 IDI2Q9BXS1 227 aa17.68■□□□□ 0.42
CSNK1D-224ENST00000584672 ASCC2Q9H1I8 757 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-224ENST00000584672 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
CSNK1D-224ENST00000584672 SIL1Q9H173 461 aa17.67■□□□□ 0.42
CSNK1D-224ENST00000584672 VCANP13611 3396 aa17.67■□□□□ 0.42
CSNK1D-224ENST00000584672 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 EYA2O00167 538 aa17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 PHKA1P46020 1223 aa17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 MAP3K10Q02779 954 aa17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
CSNK1D-224ENST00000584672 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-224ENST00000584672 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms