RNA–Protein interactions for RNA: ENST00000584483.5

SMARCD2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 821 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-211ENST00000584483 SRCAPQ6ZRS2 3230 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 PLCG2P16885 1265 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 USP5P45974 858 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 CACNB3P54284 484 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 PPARAQ07869 468 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 NFIAQ12857 509 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 SBK1Q52WX2 424 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 SNX21Q969T3 373 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 TDRD3Q9H7E2 651 aaKnown RBP17.03■□□□□ 0.32
SMARCD2-211ENST00000584483 NEDD4P46934 1319 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 EGFRP00533 1210 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 SLC4A3P48751 1232 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 SLC4A8Q2Y0W8 1093 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 RUFY3Q7L099 469 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 ZFPM1Q8IX07 1006 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 MTMR14Q8NCE2 650 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 DPF2Q92785 391 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 TCEANC2Q96MN5 208 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 MCM9Q9NXL9 1143 aa17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 SAP30BPQ9UHR5 308 aaKnown RBP17.02■□□□□ 0.32
SMARCD2-211ENST00000584483 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 PLCD1P51178 756 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 ANTXR2P58335 489 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 KRT32Q14532 448 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 MB21D2Q8IYB1 491 aaPredicted RBP17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 STK11IPQ8N1F8 1099 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
SMARCD2-211ENST00000584483 FGRP09769 529 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 PSMA5P28066 241 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 PICALMQ13492 652 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 DLGAP5Q15398 846 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 STAG1Q8WVM7 1258 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 DYNLL2Q96FJ2 89 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
SMARCD2-211ENST00000584483 IDI2Q9BXS1 227 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
SMARCD2-211ENST00000584483 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17■□□□□ 0.31
SMARCD2-211ENST00000584483 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 SIPA1L1O43166 1804 aa17■□□□□ 0.31
SMARCD2-211ENST00000584483 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 AK2P54819 239 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 NBPF9Q3BBW0 867 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 BLOC1S2Q6QNY1 142 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 SH3BP5LQ7L8J4 393 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 CHST3Q7LGC8 479 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 MICALL2Q8IY33 904 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 OGFOD1Q8N543 542 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 LARP6Q9BRS8 491 aaKnown RBP16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 PDRG1Q9NUG6 133 aa16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 ARPP21Q9UBL0 812 aaPredicted RBP16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
SMARCD2-211ENST00000584483 B4E1Z4 1266 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 WNT10BO00744 389 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 TOB2Q14106 344 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 SAMD7Q7Z3H4 446 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 GPC2Q8N158 579 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
SMARCD2-211ENST00000584483 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 CLRN2A0PK11 232 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 RBM26Q5T8P6 1007 aaKnown RBP16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 NCOA7Q8NI08 942 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 GPRC5DQ9NZD1 345 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 CNTNAP1P78357 1384 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
SMARCD2-211ENST00000584483 DDTLA6NHG4 134 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 ST18O60284 1047 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 PRDM1O75626 825 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 EPS15P42566 896 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 TCP10Q12799 353 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 TBC1D10BQ4KMP7 808 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 MFSD6Q6ZSS7 791 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 Q6ZUG5 572 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
SMARCD2-211ENST00000584483 ZSWIM5Q9P217 1185 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms