RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TEPSINQ96N21 525 aa19.33■□□□□ 0.68
CSNK1D-223ENST00000584472 IDH1O75874 414 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-223ENST00000584472 LDLRAD1Q5T700 205 aa19.32■□□□□ 0.68
CSNK1D-223ENST00000584472 CSRNP1Q96S65 589 aa19.32■□□□□ 0.68
CSNK1D-223ENST00000584472 IDI2Q9BXS1 227 aa19.32■□□□□ 0.68
CSNK1D-223ENST00000584472 TMEM39BQ9GZU3 492 aa19.32■□□□□ 0.68
CSNK1D-223ENST00000584472 TRIM6-TRIM34B2RNG4 842 aa19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 EVI5LQ96CN4 794 aa19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 HOOK2Q96ED9 719 aa19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 NOL10Q9BSC4 688 aaKnown RBP19.31■□□□□ 0.68
CSNK1D-223ENST00000584472 PPP1R12BO60237 982 aaPredicted RBP19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 ENTPD3O75355 529 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 NPM3O75607 178 aaKnown RBP19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 BAG3O95817 575 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 PLCG2P16885 1265 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 RHBDL3P58872 404 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 NFIAQ12857 509 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 TTLL12Q14166 644 aaPredicted RBP19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 CERS3Q8IU89 383 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 FAM198AQ9UFP1 575 aa19.3■□□□□ 0.68
CSNK1D-223ENST00000584472 LAMB1P07942 1786 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 UBE2Q2LH0YL09 131 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 SDSP20132 328 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 TM4SF4P48230 202 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 PPP4CP60510 307 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 NOM1Q5C9Z4 860 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
CSNK1D-223ENST00000584472 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 CYP7A1P22680 504 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 MOB2Q70IA6 237 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 ADGRA1Q86SQ6 560 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 CDAN1Q8IWY9 1227 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 MAGEB6Q8N7X4 407 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 CFHR5Q9BXR6 569 aa19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 COL2A1P02458 1487 aaPredicted RBP19.28■□□□□ 0.68
CSNK1D-223ENST00000584472 ZBTB48P10074 688 aaPredicted RBP19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 SREBF2Q12772 1141 aa19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 TCP10Q12799 353 aa19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 ABHD8Q96I13 439 aa19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 ANGEL1Q9UNK9 670 aaKnown RBP19.27■□□□□ 0.68
CSNK1D-223ENST00000584472 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 PDE6AP16499 860 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 IREB2P48200 963 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 INHBEP58166 350 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 SLC9C2Q5TAH2 1124 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 TEX11Q8IYF3 940 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.675e-10■□□□□ 9.7
CSNK1D-223ENST00000584472 AATFQ9NY61 560 aaKnown RBP eCLIP19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
CSNK1D-223ENST00000584472 OTOFQ9HC10 1997 aa19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 ATRNL1Q5VV63 1379 aa19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 PRKG1Q13976 671 aa19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 TICAM2Q86XR7 235 aa19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 SH3RF3Q8TEJ3 882 aaPredicted RBP19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 DDX4Q9NQI0 724 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-223ENST00000584472 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 TRPA1O75762 1119 aa19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 ADD2P35612 726 aa19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 SPRYD7Q5W111 196 aa19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 CASP8AP2Q9UKL3 1982 aa19.24■□□□□ 0.67
CSNK1D-223ENST00000584472 TCRBV5S4A2TA0A5A2 114 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 CAPN15O75808 1086 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 ALDH1A1P00352 501 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 CHGBP05060 677 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 PICALMQ13492 652 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 ZFPM1Q8IX07 1006 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 ANKRD13AQ8IZ07 590 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 FZD1Q9UP38 647 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 ZNF532Q9HCE3 1301 aa19.23■□□□□ 0.67
CSNK1D-223ENST00000584472 MANSC4A6NHS7 340 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 RNF113AO15541 343 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 ZFYP08048 801 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 MIGA1Q8NAN2 632 aa19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-223ENST00000584472 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 DYNLL1P63167 89 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 SH3BP5LQ7L8J4 393 aa19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 ZSCAN29Q8IWY8 852 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 SLC10A4Q96EP9 437 aa19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 RIOK1Q9BRS2 568 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 ZNF341Q9BYN7 854 aa19.21■□□□□ 0.67
CSNK1D-223ENST00000584472 HIP1O00291 1037 aa19.2■□□□□ 0.66
CSNK1D-223ENST00000584472 MAP3K9P80192 1104 aa19.2■□□□□ 0.66
CSNK1D-223ENST00000584472 MAP3K10Q02779 954 aa19.2■□□□□ 0.66
CSNK1D-223ENST00000584472 CLMNQ96JQ2 1002 aa19.2■□□□□ 0.66
CSNK1D-223ENST00000584472 MCOLN1Q9GZU1 580 aa19.2■□□□□ 0.66
CSNK1D-223ENST00000584472 FLT1P17948 1338 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms