RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TAF1CQ15572 869 aaPredicted RBP27.46■■□□□ 1.99
CASC3-207ENST00000581849 PI16Q6UXB8 463 aa27.46■■□□□ 1.99
CASC3-207ENST00000581849 ZNF384Q8TF68 577 aa27.46■■□□□ 1.99
CASC3-207ENST00000581849 RHBDL3P58872 404 aa27.45■■□□□ 1.98
CASC3-207ENST00000581849 CEP85Q6P2H3 762 aa27.45■■□□□ 1.98
CASC3-207ENST00000581849 ZFPM1Q8IX07 1006 aa27.45■■□□□ 1.98
CASC3-207ENST00000581849 FAM43AQ8N2R8 423 aa27.45■■□□□ 1.98
CASC3-207ENST00000581849 KCNH4Q9UQ05 1017 aa27.45■■□□□ 1.98
CASC3-207ENST00000581849 COL2A1P02458 1487 aaPredicted RBP27.44■■□□□ 1.98
CASC3-207ENST00000581849 TTC39AQ5SRH9 613 aa27.44■■□□□ 1.98
CASC3-207ENST00000581849 OTOP1Q7RTM1 612 aa27.44■■□□□ 1.98
CASC3-207ENST00000581849 DBNDD2Q9BQY9 259 aa27.44■■□□□ 1.98
CASC3-207ENST00000581849 TRIM17Q9Y577 477 aa27.44■■□□□ 1.98
CASC3-207ENST00000581849 MAST2Q6P0Q8 1798 aa27.44■■□□□ 1.98
CASC3-207ENST00000581849 TBC1D9Q6ZT07 1266 aa27.43■■□□□ 1.98
CASC3-207ENST00000581849 PANK1Q8TE04 598 aa27.43■■□□□ 1.98
CASC3-207ENST00000581849 RAI14Q9P0K7 980 aa27.43■■□□□ 1.98
CASC3-207ENST00000581849 LRP2BPQ9P2M1 347 aa27.43■■□□□ 1.98
CASC3-207ENST00000581849 ARHGEF6Q15052 776 aa27.42■■□□□ 1.98
CASC3-207ENST00000581849 SH3BP5LQ7L8J4 393 aa27.42■■□□□ 1.98
CASC3-207ENST00000581849 ZSCAN29Q8IWY8 852 aaPredicted RBP27.42■■□□□ 1.98
CASC3-207ENST00000581849 DDX4Q9NQI0 724 aaKnown RBP27.42■■□□□ 1.98
CASC3-207ENST00000581849 PHF20L1A8MW92 1017 aa27.41■■□□□ 1.98
CASC3-207ENST00000581849 BTBD19C9JJ37 291 aa27.41■■□□□ 1.98
CASC3-207ENST00000581849 ERC1Q8IUD2 1116 aa27.41■■□□□ 1.98
CASC3-207ENST00000581849 DDTLA6NHG4 134 aaPredicted RBP27.4■■□□□ 1.98
CASC3-207ENST00000581849 TBC1D12O60347 775 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 TLR2O60603 784 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 ANKRD23Q86SG2 305 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 SCYL3Q8IZE3 742 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 CD99L2Q8TCZ2 262 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 EFCC1Q9HA90 598 aa27.4■■□□□ 1.98
CASC3-207ENST00000581849 CXCL11O14625 94 aa27.39■■□□□ 1.98
CASC3-207ENST00000581849 SOX10P56693 466 aa27.39■■□□□ 1.98
CASC3-207ENST00000581849 PICALMQ13492 652 aa27.39■■□□□ 1.98
CASC3-207ENST00000581849 HSP90AB4PQ58FF6 505 aa27.39■■□□□ 1.98
CASC3-207ENST00000581849 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.39■■□□□ 1.98
CASC3-207ENST00000581849 DBNLQ9UJU6 430 aaKnown RBP27.39■■□□□ 1.98
CASC3-207ENST00000581849 NOL10Q9BSC4 688 aaKnown RBP27.38■■□□□ 1.97
CASC3-207ENST00000581849 DDX19BQ9UMR2 479 aa27.38■■□□□ 1.97
CASC3-207ENST00000581849 PTPN22Q9Y2R2 807 aa27.38■■□□□ 1.97
CASC3-207ENST00000581849 CTNND1O60716 968 aaKnown RBP27.37■■□□□ 1.97
CASC3-207ENST00000581849 BAG3O95817 575 aa27.37■■□□□ 1.97
CASC3-207ENST00000581849 PLCG2P16885 1265 aa27.37■■□□□ 1.97
CASC3-207ENST00000581849 DOCK1Q14185 1865 aa27.37■■□□□ 1.97
CASC3-207ENST00000581849 NAA16Q6N069 864 aaPredicted RBP27.37■■□□□ 1.97
CASC3-207ENST00000581849 EAF2Q96CJ1 260 aaPredicted RBP27.37■■□□□ 1.97
CASC3-207ENST00000581849 CHMP4BQ9H444 224 aaKnown RBP27.37■■□□□ 1.97
CASC3-207ENST00000581849 PICK1Q9NRD5 415 aa27.37■■□□□ 1.97
CASC3-207ENST00000581849 CYP2E1P05181 493 aaPredicted RBP27.36■■□□□ 1.97
CASC3-207ENST00000581849 PPP4CP60510 307 aa27.36■■□□□ 1.97
CASC3-207ENST00000581849 RPAP2Q8IXW5 612 aaPredicted RBP27.36■■□□□ 1.97
CASC3-207ENST00000581849 OSBPL5Q9H0X9 879 aaPredicted RBP27.36■■□□□ 1.97
CASC3-207ENST00000581849 SNRKQ9NRH2 765 aa27.36■■□□□ 1.97
CASC3-207ENST00000581849 MOGSQ13724 837 aa27.35■■□□□ 1.97
CASC3-207ENST00000581849 TMED8Q6PL24 325 aaPredicted RBP27.35■■□□□ 1.97
CASC3-207ENST00000581849 PTPRAP18433 802 aa27.34■■□□□ 1.97
CASC3-207ENST00000581849 TEX11Q8IYF3 940 aa27.34■■□□□ 1.97
CASC3-207ENST00000581849 RCAN3Q9UKA8 241 aa27.34■■□□□ 1.97
CASC3-207ENST00000581849 HTTP42858 3142 aa27.33■■□□□ 1.97
CASC3-207ENST00000581849 GNRH1P01148 92 aa27.33■■□□□ 1.97
CASC3-207ENST00000581849 ZAP70P43403 619 aa27.33■■□□□ 1.97
CASC3-207ENST00000581849 CCDC8Q9H0W5 538 aaPredicted RBP27.33■■□□□ 1.97
CASC3-207ENST00000581849 TLR7Q9NYK1 1049 aaKnown RBP27.33■■□□□ 1.97
CASC3-207ENST00000581849 EXOC6BQ9Y2D4 811 aa27.33■■□□□ 1.97
CASC3-207ENST00000581849 PDHXO00330 501 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 HMMRO75330 724 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 KIF22Q14807 665 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 FASTKD5Q7L8L6 764 aaKnown RBP27.32■■□□□ 1.96
CASC3-207ENST00000581849 DHX36Q9H2U1 1008 aaKnown RBP27.32■■□□□ 1.96
CASC3-207ENST00000581849 ZBTB40Q9NUA8 1239 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 AFG3L2Q9Y4W6 797 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 ZHX2Q9Y6X8 837 aa27.32■■□□□ 1.96
CASC3-207ENST00000581849 A0A0G2JLL6 359 aaPredicted RBP27.31■■□□□ 1.96
CASC3-207ENST00000581849 CAP1Q01518 475 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 C17orf99Q6UX52 265 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 PRRT2Q7Z6L0 340 aaPredicted RBP27.31■■□□□ 1.96
CASC3-207ENST00000581849 CERS3Q8IU89 383 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 ARMC5Q96C12 935 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 HERC5Q9UII4 1024 aaKnown RBP27.31■■□□□ 1.96
CASC3-207ENST00000581849 PHIPQ8WWQ0 1821 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 ADGRA2Q96PE1 1338 aa27.31■■□□□ 1.96
CASC3-207ENST00000581849 MYO5AQ9Y4I1 1855 aaKnown RBP27.31■■□□□ 1.96
CASC3-207ENST00000581849 FOCADQ5VW36 1801 aa27.3■■□□□ 1.96
CASC3-207ENST00000581849 PTPRFP10586 1907 aa27.3■■□□□ 1.96
CASC3-207ENST00000581849 LACTBP83111 547 aaPredicted RBP27.3■■□□□ 1.96
CASC3-207ENST00000581849 SH3RF3Q8TEJ3 882 aaPredicted RBP27.3■■□□□ 1.96
CASC3-207ENST00000581849 PARK7Q99497 189 aaKnown RBP27.3■■□□□ 1.96
CASC3-207ENST00000581849 TBC1D2Q9BYX2 928 aa27.3■■□□□ 1.96
CASC3-207ENST00000581849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.3■■□□□ 1.96
CASC3-207ENST00000581849 PIH1D3Q9NQM4 214 aaKnown RBP27.3■■□□□ 1.96
CASC3-207ENST00000581849 AATFQ9NY61 560 aaKnown RBP eCLIP27.3■■□□□ 1.96
CASC3-207ENST00000581849 COG6Q9Y2V7 657 aa27.3■■□□□ 1.96
CASC3-207ENST00000581849 SLC45A1Q9Y2W3 748 aa27.3■■□□□ 1.96
CASC3-207ENST00000581849 AACSQ86V21 672 aa27.29■■□□□ 1.96
CASC3-207ENST00000581849 RHPN1Q8TCX5 695 aa27.29■■□□□ 1.96
CASC3-207ENST00000581849 PI4KBQ9UBF8 816 aa27.29■■□□□ 1.96
CASC3-207ENST00000581849 CDK5RAP2Q96SN8 1893 aa27.29■■□□□ 1.96
CASC3-207ENST00000581849 RBBP6Q7Z6E9 1792 aaKnown RBP27.28■■□□□ 1.96
CASC3-207ENST00000581849 PRMT2P55345 433 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms