RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 RIMBP2O15034 1052 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 RRP12Q5JTH9 1297 aaKnown RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 NSUN7Q8NE18 718 aaKnown RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 NKX2-3Q8TAU0 364 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 CHAMP1Q96JM3 812 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 TMEM87BQ96K49 555 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 INCENPQ9NQS7 918 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 LMBRD1Q9NUN5 540 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
MKS1-211ENST00000581761 ANGEL1Q9UNK9 670 aaKnown RBP17.19■□□□□ 0.34
MKS1-211ENST00000581761 CEP350Q5VT06 3117 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 KDM4AO75164 1064 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 LDHCP07864 332 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
MKS1-211ENST00000581761 GRIK5Q16478 980 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
MKS1-211ENST00000581761 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
MKS1-211ENST00000581761 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 FAM184AQ8NB25 1140 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 NCOA5Q9HCD5 579 aaKnown RBP17.18■□□□□ 0.34
MKS1-211ENST00000581761 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
MKS1-211ENST00000581761 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
MKS1-211ENST00000581761 CTDNEP1O95476 244 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 KIF3AQ9Y496 699 aa17.17■□□□□ 0.34
MKS1-211ENST00000581761 IFIT3O14879 490 aaKnown RBP17.16■□□□□ 0.34
MKS1-211ENST00000581761 BAG3O95817 575 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 LMNB1P20700 586 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 NFXL1Q6ZNB6 911 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 EYA3Q99504 573 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
MKS1-211ENST00000581761 GZF1Q9H116 711 aaPredicted RBP17.16■□□□□ 0.34
MKS1-211ENST00000581761 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
MKS1-211ENST00000581761 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 FAM205AQ6ZU69 1335 aa17.16■□□□□ 0.34
MKS1-211ENST00000581761 CYP2D7A0A087X1C5 515 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
MKS1-211ENST00000581761 MFSD14BQ5SR56 506 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 IGDCC4Q8TDY8 1250 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 PSMD1Q99460 953 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 LY9Q9HBG7 655 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 DCP1AQ9NPI6 582 aaPredicted RBP17.15■□□□□ 0.34
MKS1-211ENST00000581761 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
MKS1-211ENST00000581761 HPS5Q9UPZ3 1129 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 SBF1O95248 1867 aa17.15■□□□□ 0.34
MKS1-211ENST00000581761 USP17L12C9JPN9 530 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 USP17L21D6R901 530 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 H3BQV1 296 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 USP5P45974 858 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 PPP4CP60510 307 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 GTF2IP78347 998 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 SART3Q15020 963 aaKnown RBP17.14■□□□□ 0.33
MKS1-211ENST00000581761 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 IFFO2Q5TF58 517 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
MKS1-211ENST00000581761 ESR2Q92731 530 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
MKS1-211ENST00000581761 ARPP21Q9UBL0 812 aaPredicted RBP17.14■□□□□ 0.33
MKS1-211ENST00000581761 ERICH2A1L162 156 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 G3V3G9 751 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 CPLX1O14810 134 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
MKS1-211ENST00000581761 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
MKS1-211ENST00000581761 LIFRP42702 1097 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
MKS1-211ENST00000581761 FOSBP53539 338 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 SBK1Q52WX2 424 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 SLF2Q8IX21 1173 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 MTA3Q9BTC8 594 aa17.13■□□□□ 0.33
MKS1-211ENST00000581761 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
MKS1-211ENST00000581761 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms