RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 SH3RF3Q8TEJ3 882 aaPredicted RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 RIOK1Q9BRS2 568 aaKnown RBP15.35■□□□□ 0.05
SNORD55-201ENST00000581525 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
SNORD55-201ENST00000581525 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
SNORD55-201ENST00000581525 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 GOLIM4O00461 696 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 CA12O43570 354 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 INHBEP58166 350 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 SLC9C2Q5TAH2 1124 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 MAGEB6Q8N7X4 407 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 EDC3Q96F86 508 aaKnown RBP15.34■□□□□ 0.05
SNORD55-201ENST00000581525 CLMNQ96JQ2 1002 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 OSBPL5Q9H0X9 879 aaPredicted RBP15.34■□□□□ 0.05
SNORD55-201ENST00000581525 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNORD55-201ENST00000581525 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
SNORD55-201ENST00000581525 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
SNORD55-201ENST00000581525 FOXN1O15353 648 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 PDE6AP16499 860 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 ADD2P35612 726 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
SNORD55-201ENST00000581525 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 TEX11Q8IYF3 940 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 WNK4Q96J92 1243 aa15.33■□□□□ 0.04
SNORD55-201ENST00000581525 DNAJC2Q99543 621 aaKnown RBP15.33■□□□□ 0.04
SNORD55-201ENST00000581525 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
SNORD55-201ENST00000581525 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
SNORD55-201ENST00000581525 GJA5P36382 358 aa15.32■□□□□ 0.04
SNORD55-201ENST00000581525 DYNLL1P63167 89 aaKnown RBP15.32■□□□□ 0.04
SNORD55-201ENST00000581525 VGLL4Q14135 290 aa15.32■□□□□ 0.04
SNORD55-201ENST00000581525 GPATCH3Q96I76 525 aa15.32■□□□□ 0.04
SNORD55-201ENST00000581525 CFHR5Q9BXR6 569 aa15.32■□□□□ 0.04
SNORD55-201ENST00000581525 SAGE1Q9NXZ1 904 aa15.32■□□□□ 0.04
SNORD55-201ENST00000581525 SPDYE5A6NIY4 337 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 ERC2O15083 957 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
SNORD55-201ENST00000581525 CTCFP49711 727 aaPredicted RBP15.31■□□□□ 0.04
SNORD55-201ENST00000581525 NUCB1Q02818 461 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 GRM1Q13255 1194 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 MIGA2Q7L4E1 593 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 KBTBD3Q8NAB2 608 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
SNORD55-201ENST00000581525 MS4A4AQ96JQ5 239 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 SNCAIPQ9Y6H5 919 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 ZNF532Q9HCE3 1301 aa15.31■□□□□ 0.04
SNORD55-201ENST00000581525 MANSC4A6NHS7 340 aaPredicted RBP15.3■□□□□ 0.04
SNORD55-201ENST00000581525 LAMB1P07942 1786 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
SNORD55-201ENST00000581525 FLT1P17948 1338 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 MX1P20591 662 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 PICALMQ13492 652 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 ERO1BQ86YB8 467 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 FOXP4Q8IVH2 680 aaPredicted RBP15.3■□□□□ 0.04
SNORD55-201ENST00000581525 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNORD55-201ENST00000581525 PI4KBQ9UBF8 816 aa15.3■□□□□ 0.04
SNORD55-201ENST00000581525 HERC5Q9UII4 1024 aaKnown RBP15.3■□□□□ 0.04
SNORD55-201ENST00000581525 CTNND1O60716 968 aaKnown RBP15.29■□□□□ 0.04
SNORD55-201ENST00000581525 INPP5BP32019 993 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 PDE1AP54750 535 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 PPATQ06203 517 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 MIGA1Q8NAN2 632 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
SNORD55-201ENST00000581525 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 OSBPL3Q9H4L5 887 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 CSADQ9Y600 493 aa15.29■□□□□ 0.04
SNORD55-201ENST00000581525 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 NOM1Q5C9Z4 860 aaKnown RBP15.28■□□□□ 0.04
SNORD55-201ENST00000581525 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
SNORD55-201ENST00000581525 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
SNORD55-201ENST00000581525 PPIL2Q13356 520 aa15.27■□□□□ 0.04
SNORD55-201ENST00000581525 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.04
SNORD55-201ENST00000581525 MAPKAPK5Q8IW41 473 aa15.27■□□□□ 0.04
SNORD55-201ENST00000581525 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
SNORD55-201ENST00000581525 OTOFQ9HC10 1997 aa15.27■□□□□ 0.03
SNORD55-201ENST00000581525 FOCADQ5VW36 1801 aa15.27■□□□□ 0.03
SNORD55-201ENST00000581525 CHGBP05060 677 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 SLURP2P0DP57 97 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 GTF2A2P52657 109 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 SCYL3Q8IZE3 742 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 PTPN18Q99952 460 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 CRNKL1Q9BZJ0 848 aaKnown RBP15.26■□□□□ 0.03
SNORD55-201ENST00000581525 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
SNORD55-201ENST00000581525 EHD4Q9H223 541 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms