RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 FAM151AQ8WW52 585 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 HOOK2Q96ED9 719 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
GGA3-209ENST00000580646 MCOLN1Q9GZU1 580 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 USP40Q9NVE5 1235 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 GJA5P36382 358 aa12□□□□□ -0.49
GGA3-209ENST00000580646 ZAP70P43403 619 aa12□□□□□ -0.49
GGA3-209ENST00000580646 GSTO1P78417 241 aa12□□□□□ -0.49
GGA3-209ENST00000580646 TCP10Q12799 353 aa12□□□□□ -0.49
GGA3-209ENST00000580646 DGKZQ13574 1117 aa12□□□□□ -0.49
GGA3-209ENST00000580646 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
GGA3-209ENST00000580646 TICAM2Q86XR7 235 aa12□□□□□ -0.49
GGA3-209ENST00000580646 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
GGA3-209ENST00000580646 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
GGA3-209ENST00000580646 PI4K2BQ8TCG2 481 aa12□□□□□ -0.49
GGA3-209ENST00000580646 NSUN4Q96CB9 384 aaKnown RBP12□□□□□ -0.49
GGA3-209ENST00000580646 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
GGA3-209ENST00000580646 LNPKQ9C0E8 428 aa12□□□□□ -0.49
GGA3-209ENST00000580646 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
GGA3-209ENST00000580646 GAKO14976 1311 aa12□□□□□ -0.49
GGA3-209ENST00000580646 PDE4DIPQ5VU43 2346 aa12□□□□□ -0.49
GGA3-209ENST00000580646 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
GGA3-209ENST00000580646 ALDH1A1P00352 501 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 PDE1AP54750 535 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 NFIAQ12857 509 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 VGLL4Q14135 290 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 DCAF15Q66K64 600 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 OPTNQ96CV9 577 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 CFHR5Q9BXR6 569 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 SNRKQ9NRH2 765 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 PAG1Q9NWQ8 432 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 FAM198AQ9UFP1 575 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 CSADQ9Y600 493 aa11.99□□□□□ -0.49
GGA3-209ENST00000580646 CASP8AP2Q9UKL3 1982 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 GPR25O00155 361 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 LDHCP07864 332 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 MECOMQ03112 1051 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 MAP3K12Q12852 859 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 NOM1Q5C9Z4 860 aaKnown RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 MIGA2Q7L4E1 593 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 OTUD7AQ8TE49 926 aaPredicted RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 R3HDMLQ9H3Y0 253 aa11.98□□□□□ -0.49
GGA3-209ENST00000580646 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
GGA3-209ENST00000580646 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
GGA3-209ENST00000580646 ENTPD3O75355 529 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 BTDP43251 543 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 OTUD7BQ6GQQ9 843 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 PLEKHM2Q8IWE5 1019 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 ZNF384Q8TF68 577 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
GGA3-209ENST00000580646 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
GGA3-209ENST00000580646 ANTXR1Q9H6X2 564 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 RAI14Q9P0K7 980 aa11.97□□□□□ -0.49
GGA3-209ENST00000580646 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 GOLIM4O00461 696 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 WDHD1O75717 1129 aaPredicted RBP11.96□□□□□ -0.49
GGA3-209ENST00000580646 RGS3P49796 1198 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 GTF2A2P52657 109 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 LRRFIP1Q32MZ4 808 aaKnown RBP11.96□□□□□ -0.49
GGA3-209ENST00000580646 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
GGA3-209ENST00000580646 ZSCAN25Q6NSZ9 544 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 CTU1Q7Z7A3 348 aaKnown RBP11.96□□□□□ -0.49
GGA3-209ENST00000580646 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 PTPN18Q99952 460 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.96□□□□□ -0.493e-10■■■■□ 23.1
GGA3-209ENST00000580646 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.49
GGA3-209ENST00000580646 FKTNO75072 461 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
GGA3-209ENST00000580646 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
GGA3-209ENST00000580646 ZFYP08048 801 aaPredicted RBP11.95□□□□□ -0.5
GGA3-209ENST00000580646 PDE4AP27815 886 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 INPP5BP32019 993 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 RHBDL3P58872 404 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 PPP4CP60510 307 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 UBE3CQ15386 1083 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 TSHZ3Q63HK5 1081 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 BRI3BPQ8WY22 251 aa11.95□□□□□ -0.5
GGA3-209ENST00000580646 EVI5LQ96CN4 794 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms