RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 GCN1Q92616 2671 aaKnown RBP3.19□□□□□ -1.9
CTC1-207ENST00000580299 DMXL1Q9Y485 3027 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 BRWD1Q9NSI6 2320 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 ZNF236Q9UL36 1845 aa3.19□□□□□ -1.9
CTC1-207ENST00000580299 ZFHX4Q86UP3 3567 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 TRIOO75962 3097 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 CLRN2A0PK11 232 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 BTBD11A6QL63 1104 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 SOBPA7XYQ1 873 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 PROB1E7EW31 1015 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 MSCO60682 206 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 RAG1P15918 1043 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 ZKSCAN1P17029 563 aaPredicted RBP3.18□□□□□ -1.9
CTC1-207ENST00000580299 EIF4G2P78344 907 aaKnown RBP eCLIP3.18□□□□□ -1.9
CTC1-207ENST00000580299 PPATQ06203 517 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 RASA3Q14644 834 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 PUS10Q3MIT2 529 aaKnown RBP3.18□□□□□ -1.9
CTC1-207ENST00000580299 HSP90AB3PQ58FF7 597 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 AMER1Q5JTC6 1135 aaPredicted RBP3.18□□□□□ -1.9
CTC1-207ENST00000580299 EPHA10Q5JZY3 1008 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 DACT2Q5SW24 774 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 PPP2R2DQ66LE6 453 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 KIAA0825Q8IV33 1275 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 FAM178BQ8IXR5 827 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 ZNF34Q8IZ26 560 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 NGEFQ8N5V2 710 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.18□□□□□ -1.9
CTC1-207ENST00000580299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.18□□□□□ -1.9
CTC1-207ENST00000580299 PBX4Q9BYU1 374 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 ZBTB3Q9H5J0 574 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 PDLIM7Q9NR12 457 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 PODXL2Q9NZ53 605 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 CHD7Q9P2D1 2997 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 USP16Q9Y5T5 823 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 TACC3Q9Y6A5 838 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 WDR87Q6ZQQ6 2873 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 ATAD5Q96QE3 1844 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 NCOR2Q9Y618 2525 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
CTC1-207ENST00000580299 ZNF536O15090 1300 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 XDHP47989 1333 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 AOX1Q06278 1338 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 SH3TC1Q8TE82 1336 aa3.18□□□□□ -1.9
CTC1-207ENST00000580299 LOC285556D6RIA3 1793 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 SIP14410 1827 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 MED23Q9ULK4 1368 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 GNAT3A8MTJ3 354 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 DNM1LO00429 736 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 IRF6O14896 467 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 MAP3K13O43283 966 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 KDM4AO75164 1064 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 HCLS1P14317 486 aaPredicted RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 HSP90B1P14625 803 aaKnown RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 ATP2B4P23634 1241 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 IRS1P35568 1242 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 RBM5P52756 815 aaKnown RBP eCLIP3.17□□□□□ -1.9
CTC1-207ENST00000580299 TCF15Q12870 199 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 PPIGQ13427 754 aaKnown RBP eCLIP3.17□□□□□ -1.91e-9■■■■□ 20.6
CTC1-207ENST00000580299 CDCA8Q53HL2 280 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 DCAF15Q66K64 600 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 PSRC1Q6PGN9 363 aaPredicted RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 GIGYF2Q6Y7W6 1299 aaKnown RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 FASTKD5Q7L8L6 764 aaKnown RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 ASCL5Q7RTU5 278 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 BMP8AQ7Z5Y6 402 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 ARRDC4Q8NCT1 418 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 SOCS4Q8WXH5 440 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 NKD2Q969F2 451 aaPredicted RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 PBXIP1Q96AQ6 731 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 ZBED3Q96IU2 234 aaPredicted RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 WRNIP1Q96S55 665 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 NKX2-4Q9H2Z4 354 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 CD320Q9NPF0 282 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 TRMT112Q9UI30 125 aaKnown RBP3.17□□□□□ -1.9
CTC1-207ENST00000580299 PNMA3Q9UL41 463 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 SNCAIPQ9Y6H5 919 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 RALGAPA2Q2PPJ7 1873 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 NAV2Q8IVL1 2488 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 CACNA1HO95180 2353 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 MYH13Q9UKX3 1938 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 GAKO14976 1311 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 TECTAO75443 2155 aa3.17□□□□□ -1.9
CTC1-207ENST00000580299 FLNBO75369 2602 aaKnown RBP3.16□□□□□ -1.9
CTC1-207ENST00000580299 CEMIPQ8WUJ3 1361 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 POTEB3A0JP26 581 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 APBB1O00213 710 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 GALR2O43603 387 aaPredicted RBP3.16□□□□□ -1.9
CTC1-207ENST00000580299 CLTBP09497 229 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 CYP2C8P10632 490 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 POU3F3P20264 500 aaPredicted RBP3.16□□□□□ -1.9
CTC1-207ENST00000580299 SDHBP21912 280 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 PBX2P40425 430 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 RPS8P62241 208 aaKnown RBP3.16□□□□□ -1.9
CTC1-207ENST00000580299 TRIM32Q13049 653 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 MAP2K5Q13163 448 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 FAM110CQ1W6H9 321 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 TRIM60Q495X7 471 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 MAP3K21Q5TCX8 1036 aa3.16□□□□□ -1.9
CTC1-207ENST00000580299 LHX8Q68G74 356 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms