RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PTPRAP18433 802 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 FLT3LGP49771 235 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 IRF5Q13568 498 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 ATG9AQ7Z3C6 839 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 SLC45A1Q9Y2W3 748 aa12.49□□□□□ -0.41
CALCOCO2-227ENST00000575560 SALL1Q9NSC2 1324 aa12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 ZBTB22O15209 634 aa12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 ELNP15502 786 aa12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 PAK6Q9NQU5 681 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO2-227ENST00000575560 PTPRCP08575 1304 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 DLL1O00548 723 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 EVI5O60447 810 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 ENTPD3O75355 529 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 INHAP05111 366 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 PICK1Q9NRD5 415 aa12.47□□□□□ -0.41
CALCOCO2-227ENST00000575560 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 RGS3P49796 1198 aa12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 DEFB118Q96PH6 123 aa12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
CALCOCO2-227ENST00000575560 GAKO14976 1311 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 TNPO2O14787 897 aaKnown RBP12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 SEMA3EO15041 775 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 CIAO1O76071 339 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 PAWRQ96IZ0 340 aaKnown RBP12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 DENND2AQ9ULE3 1009 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
CALCOCO2-227ENST00000575560 MGAMO43451 1857 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 RFX7Q2KHR2 1363 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 BMP8BP34820 402 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 PHKA1P46020 1223 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 GDF15Q99988 308 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 DDX4Q9NQI0 724 aaKnown RBP12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 LAMA2P24043 3122 aaKnown RBP12.44□□□□□ -0.42
CALCOCO2-227ENST00000575560 TRIM75PA6NK02 468 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 TBC1D12O60347 775 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 COA7Q96BR5 231 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 SIL1Q9H173 461 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 UNC80Q8N2C7 3258 aa12.43□□□□□ -0.42
CALCOCO2-227ENST00000575560 TREML2Q5T2D2 321 aa12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 ZSCAN29Q8IWY8 852 aaPredicted RBP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 ZGPATQ8N5A5 531 aaKnown RBP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 ANKLE1Q8NAG6 615 aa12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 DIS3LQ8TF46 1054 aaKnown RBP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 GJD2Q9UKL4 321 aa12.42□□□□□ -0.42
CALCOCO2-227ENST00000575560 ADORA1P30542 326 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 IL15P40933 162 aaPredicted RBP12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 RHBDL3P58872 404 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 CCDC102BQ68D86 513 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 DNAH12Q6ZR08 3092 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
CALCOCO2-227ENST00000575560 DOCK3Q8IZD9 2030 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 PDS5AQ29RF7 1337 aaKnown RBP12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 CUL9Q8IWT3 2517 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 GPR75-ASB3A0A0A6YYF3 556 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 ANP32CO43423 234 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 BTDP43251 543 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 DZIP1Q86YF9 867 aaKnown RBP12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
CALCOCO2-227ENST00000575560 RPTORQ8N122 1335 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms