RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CCT2P78371 535 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 MPNDQ8N594 471 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 TBC1D22AQ8WUA7 517 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 TMX4Q9H1E5 349 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 JAG2Q9Y219 1238 aa33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 DDX49Q9Y6V7 483 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-210ENST00000574322 VPS37CA5D8V6 355 aaPredicted RBP33.38■■■□□ 2.93
CTDNEP1-210ENST00000574322 C21orf2O43822 256 aa33.38■■■□□ 2.93
CTDNEP1-210ENST00000574322 LDHCP07864 332 aa33.38■■■□□ 2.93
CTDNEP1-210ENST00000574322 COA1Q9GZY4 146 aa33.38■■■□□ 2.93
CTDNEP1-210ENST00000574322 INCENPQ9NQS7 918 aa33.38■■■□□ 2.93
CTDNEP1-210ENST00000574322 SLX4Q8IY92 1834 aa33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 BRCA1P38398 1863 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 PTPDC1A2A3K4 754 aa33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 KDM4AO75164 1064 aa33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 CERS3Q8IU89 383 aa33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 NCOA5Q9HCD5 579 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 GOLGB1Q14789 3259 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 BAZ2AQ9UIF9 1905 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-210ENST00000574322 SBK1Q52WX2 424 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 C7orf43Q8WVR3 580 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 LY9Q9HBG7 655 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 DCP1AQ9NPI6 582 aaPredicted RBP33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 GOLGA8BA8MQT2 603 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 CTR9Q6PD62 1173 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 OLFM4Q6UX06 510 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 CDC37L1Q7L3B6 337 aa33.36■■■□□ 2.93
CTDNEP1-210ENST00000574322 TCHHQ07283 1943 aa33.35■■■□□ 2.93
CTDNEP1-210ENST00000574322 FAM184AQ8NB25 1140 aa33.35■■■□□ 2.93
CTDNEP1-210ENST00000574322 NAP1L2Q9ULW6 460 aaPredicted RBP33.35■■■□□ 2.93
CTDNEP1-210ENST00000574322 LAMB1P07942 1786 aa33.34■■■□□ 2.93
CTDNEP1-210ENST00000574322 MINDY4BA8MYZ0 360 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 GRIK5Q16478 980 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 TMEM67Q5HYA8 995 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 FAM163AQ96GL9 167 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 BAG3O95817 575 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 APOA5Q6Q788 366 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 DPP8Q6V1X1 898 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 RGS22Q8NE09 1264 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 DDX11Q96FC9 970 aa33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 ARPP21Q9UBL0 812 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 MKRN1Q9UHC7 482 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-210ENST00000574322 NID2Q14112 1375 aa33.32■■■□□ 2.93
CTDNEP1-210ENST00000574322 MROH7-TTC4A0A0A0MT08 1334 aa33.32■■■□□ 2.92
CTDNEP1-210ENST00000574322 SUGT1Q9Y2Z0 365 aa33.32■■■□□ 2.92
CTDNEP1-210ENST00000574322 MYH2Q9UKX2 1941 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 USP17L12C9JPN9 530 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 USP17L21D6R901 530 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 IFIT3O14879 490 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 MBD3O95983 291 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 SART3Q15020 963 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 SOGA3Q5TF21 947 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 CC2D2BQ6DHV5 1058 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 TMTC2Q8N394 836 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 ESR2Q92731 530 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 ZC3H12CQ9C0D7 883 aaKnown RBP33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 CCDC93Q567U6 631 aa33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 GZF1Q9H116 711 aaPredicted RBP33.31■■■□□ 2.92
CTDNEP1-210ENST00000574322 FDPSP14324 419 aaKnown RBP33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 NT5C2P49902 561 aa33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 RCAN1P53805 252 aa33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 MFSD14BQ5SR56 506 aa33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 SLF2Q8IX21 1173 aa33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 GPT2Q8TD30 523 aa33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 RTFDC1Q9BY42 306 aaPredicted RBP33.3■■■□□ 2.92
CTDNEP1-210ENST00000574322 USP48Q86UV5 1035 aa33.29■■■□□ 2.92
CTDNEP1-210ENST00000574322 SENP2Q9HC62 589 aa33.29■■■□□ 2.92
CTDNEP1-210ENST00000574322 CNPY2Q9Y2B0 182 aa33.29■■■□□ 2.92
CTDNEP1-210ENST00000574322 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.29■■■□□ 2.92
CTDNEP1-210ENST00000574322 GPR75-ASB3A0A0A6YYF3 556 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 ORC4O43929 436 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 YBX3P16989 372 aaKnown RBP eCLIP33.28■■■□□ 2.921e-6■■□□□ 13.3
CTDNEP1-210ENST00000574322 DIXDC1Q155Q3 683 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 GPR162Q16538 588 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 EYA3Q99504 573 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 ZSCAN16Q9H4T2 348 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 CSPP1Q1MSJ5 1256 aa33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 RRP12Q5JTH9 1297 aaKnown RBP33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 NOL10Q9BSC4 688 aaKnown RBP33.28■■■□□ 2.92
CTDNEP1-210ENST00000574322 GAKO14976 1311 aa33.27■■■□□ 2.92
CTDNEP1-210ENST00000574322 ZBTB43O43298 467 aa33.27■■■□□ 2.92
CTDNEP1-210ENST00000574322 METAP2P50579 478 aaKnown RBP eCLIP33.27■■■□□ 2.924e-6■□□□□ 8.6
CTDNEP1-210ENST00000574322 FOXD4L6Q3SYB3 417 aaPredicted RBP33.27■■■□□ 2.92
CTDNEP1-210ENST00000574322 FOXD4L3Q6VB84 417 aaPredicted RBP33.27■■■□□ 2.92
CTDNEP1-210ENST00000574322 TOMM22Q9NS69 142 aa33.27■■■□□ 2.92
CTDNEP1-210ENST00000574322 CYP2D7A0A087X1C5 515 aa33.26■■■□□ 2.92
CTDNEP1-210ENST00000574322 H3BQV1 296 aa33.26■■■□□ 2.92
CTDNEP1-210ENST00000574322 DNM1Q05193 864 aaKnown RBP33.26■■■□□ 2.92
CTDNEP1-210ENST00000574322 IFFO2Q5TF58 517 aa33.26■■■□□ 2.92
CTDNEP1-210ENST00000574322 RTKN2Q8IZC4 609 aa33.26■■■□□ 2.92
CTDNEP1-210ENST00000574322 ERICH2A1L162 156 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 CPLX1O14810 134 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 RIMBP2O15034 1052 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 SLC3A2P08195 630 aaKnown RBP33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 RESTQ13127 1097 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 WTAPQ15007 396 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 GRIPAP1Q4V328 841 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 NFXL1Q6ZNB6 911 aa33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 SH3RF3Q8TEJ3 882 aaPredicted RBP33.25■■■□□ 2.91
CTDNEP1-210ENST00000574322 ISY1Q9ULR0 285 aaKnown RBP33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms