RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PRAMEF18Q5VWM3 479 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 CDCA5Q96FF9 252 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 FAM227BQ96M60 508 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 FAM198AQ9UFP1 575 aa17.42■□□□□ 0.38
NPLOC4-209ENST00000572760 A0A0D9SFI3 127 aa17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 ITGBL1O95965 494 aaPredicted RBP17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 APPP05067 770 aa17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 GNAT2P19087 354 aa17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 SUPT20HL1Q3ZLR7 823 aa17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 DDX4Q9NQI0 724 aaKnown RBP17.41■□□□□ 0.38
NPLOC4-209ENST00000572760 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 CHMLP26374 656 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 DLK2Q6UY11 383 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 SDR42E1Q8WUS8 393 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 OSBPL5Q9H0X9 879 aaPredicted RBP17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 FLT1P17948 1338 aa17.4■□□□□ 0.38
NPLOC4-209ENST00000572760 MYH8P13535 1937 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 PRKAB2O43741 272 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 NBPF12Q5TAG4 269 aaPredicted RBP17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 ZFPM1Q8IX07 1006 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
NPLOC4-209ENST00000572760 CDC45O75419 566 aa17.38■□□□□ 0.37
NPLOC4-209ENST00000572760 CELF2O95319 508 aaKnown RBP17.38■□□□□ 0.37
NPLOC4-209ENST00000572760 POLR3DP05423 398 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-209ENST00000572760 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
NPLOC4-209ENST00000572760 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-209ENST00000572760 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 TDO2P48775 406 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 PRKG1Q13976 671 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 TEPSINQ96N21 525 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 CSRNP1Q96S65 589 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 TRIM34Q9BYJ4 488 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 DHX36Q9H2U1 1008 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 DCP1AQ9NPI6 582 aaPredicted RBP17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 RAD50Q92878 1312 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
NPLOC4-209ENST00000572760 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
NPLOC4-209ENST00000572760 PPP1R12BO60237 982 aaPredicted RBP17.36■□□□□ 0.37
NPLOC4-209ENST00000572760 SLC4A8Q2Y0W8 1093 aa17.36■□□□□ 0.37
NPLOC4-209ENST00000572760 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
NPLOC4-209ENST00000572760 GSG1L2A8MUP6 293 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 SH3BP5LQ7L8J4 393 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 ARMC9Q7Z3E5 817 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 CDAN1Q8IWY9 1227 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 IFNL3Q8IZI9 196 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 C2orf69Q8N8R5 385 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 NAPBQ9H115 298 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 GBA2Q9HCG7 927 aaPredicted RBP17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 PI4KBQ9UBF8 816 aa17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
NPLOC4-209ENST00000572760 LAMB1P07942 1786 aa17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 C1QTNF8P60827 252 aa17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 ATRNL1Q5VV63 1379 aa17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 KIAA1211Q6ZU35 1233 aa17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 MIGA2Q7L4E1 593 aa17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 ANGEL1Q9UNK9 670 aaKnown RBP17.34■□□□□ 0.37
NPLOC4-209ENST00000572760 DDX60LQ5H9U9 1706 aaKnown RBP17.33■□□□□ 0.37
NPLOC4-209ENST00000572760 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 MINDY4BA8MYZ0 360 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 USP17L12C9JPN9 530 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 USP17L21D6R901 530 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 HSPD1P10809 573 aaKnown RBP17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 APLP1P51693 650 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 VPS53Q5VIR6 699 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 FOXP4Q8IVH2 680 aaPredicted RBP17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 ARPP21Q9UBL0 812 aaPredicted RBP17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 MKRN1Q9UHC7 482 aaKnown RBP17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 PAPPA2Q9BXP8 1791 aa17.33■□□□□ 0.36
NPLOC4-209ENST00000572760 SGSM2O43147 1006 aa17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 IREB2P48200 963 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 FKBP1BP68106 108 aa17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 CST9Q5W186 159 aa17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-209ENST00000572760 CYP2D6P10635 497 aa17.31■□□□□ 0.36
NPLOC4-209ENST00000572760 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms