RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
NPLOC4-207ENST00000572346 ENTPD3O75355 529 aa18.28■□□□□ 0.52
NPLOC4-207ENST00000572346 PSMC4P43686 418 aa18.28■□□□□ 0.52
NPLOC4-207ENST00000572346 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
NPLOC4-207ENST00000572346 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
NPLOC4-207ENST00000572346 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 A0A1B0GUL7 405 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 CXCL11O14625 94 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 HABP4Q5JVS0 413 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 DZIP1Q86YF9 867 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 FAM163AQ96GL9 167 aaPredicted RBP18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 TRIM47Q96LD4 638 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 ABCF2Q9UG63 623 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 SRRDQ9UH36 339 aa18.27■□□□□ 0.52
NPLOC4-207ENST00000572346 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 GNAI3P08754 354 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 RLBP1P12271 317 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 OSBPP22059 807 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 TFCP2Q12800 502 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 MTX1Q13505 466 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 GPAT2Q6NUI2 795 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 SCYL3Q8IZE3 742 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 DDX4Q9NQI0 724 aaKnown RBP18.26■□□□□ 0.51
NPLOC4-207ENST00000572346 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 FMNL1O95466 1100 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 PTPRAP18433 802 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 BTDP43251 543 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 MAP3K10Q02779 954 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 SPTY2D1Q68D10 685 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 ZSCAN29Q8IWY8 852 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 AKAP2Q9Y2D5 859 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 ZHX2Q9Y6X8 837 aa18.25■□□□□ 0.51
NPLOC4-207ENST00000572346 PTPRFP10586 1907 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 A0A0G2JLL6 359 aaPredicted RBP18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 CYP2C8P10632 490 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 BCRP11274 1271 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 HOXD10P28358 340 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 MVPQ14764 893 aaKnown RBP18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 MTFR1Q15390 333 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 PRRT2Q7Z6L0 340 aaPredicted RBP18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 PICK1Q9NRD5 415 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 MGAMO43451 1857 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 DOCK1Q14185 1865 aa18.24■□□□□ 0.51
NPLOC4-207ENST00000572346 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 MECOMQ03112 1051 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 PICALMQ13492 652 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 FASTKD5Q7L8L6 764 aaKnown RBP18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 AFG3L2Q9Y4W6 797 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 MYPNQ86TC9 1320 aa18.23■□□□□ 0.51
NPLOC4-207ENST00000572346 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
NPLOC4-207ENST00000572346 CTNND1O60716 968 aaKnown RBP18.22■□□□□ 0.51
NPLOC4-207ENST00000572346 GRK4P32298 578 aa18.22■□□□□ 0.51
NPLOC4-207ENST00000572346 ZNF384Q8TF68 577 aa18.22■□□□□ 0.51
NPLOC4-207ENST00000572346 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
NPLOC4-207ENST00000572346 RHBDL3P58872 404 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 GADL1Q6ZQY3 521 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 SHISA4Q96DD7 197 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 CHMP4BQ9H444 224 aaKnown RBP18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 HMG20BQ9P0W2 317 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 DDX19BQ9UMR2 479 aa18.21■□□□□ 0.51
NPLOC4-207ENST00000572346 FCGRTP55899 365 aa18.2■□□□□ 0.5
NPLOC4-207ENST00000572346 PRKCZQ05513 592 aa18.2■□□□□ 0.5
NPLOC4-207ENST00000572346 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.2■□□□□ 0.5
NPLOC4-207ENST00000572346 SLC45A1Q9Y2W3 748 aa18.2■□□□□ 0.5
NPLOC4-207ENST00000572346 TRIM75PA6NK02 468 aa18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 CCDC84Q86UT8 332 aaPredicted RBP18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 NSUN4Q96CB9 384 aaKnown RBP18.19■□□□□ 0.5
NPLOC4-207ENST00000572346 CEP290O15078 2479 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 TBC1D12O60347 775 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 GNAI2P04899 355 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 GORABQ5T7V8 394 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 NKX2-3Q8TAU0 364 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 GABRQQ9UN88 632 aa18.18■□□□□ 0.5
NPLOC4-207ENST00000572346 FAM196BA6NMK8 535 aa18.17■□□□□ 0.5
NPLOC4-207ENST00000572346 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
NPLOC4-207ENST00000572346 LDHCP07864 332 aa18.17■□□□□ 0.5
NPLOC4-207ENST00000572346 GJB1P08034 283 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms