RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DDX10Q13206 875 aaKnown RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 CCINQ13939 588 aa9.39□□□□□ -0.91
CNOT1-222ENST00000570139 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
CNOT1-222ENST00000570139 CCNJLQ8IV13 435 aa9.39□□□□□ -0.91
CNOT1-222ENST00000570139 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 SLKQ9H2G2 1235 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
CNOT1-222ENST00000570139 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 ROBO2Q9HCK4 1378 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 ANP32CO43423 234 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 PF4P02776 101 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 SOX18P35713 384 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 CEBPAP49715 358 aaPredicted RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 RPS26P62854 115 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 CAMK2GQ13555 558 aaPredicted RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 EFHC2Q5JST6 749 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 NCAPG2Q86XI2 1143 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 NKD1Q969G9 470 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 RNPC3Q96LT9 517 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 TCF12Q99081 682 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 CHMP4AQ9BY43 222 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 METTL14Q9HCE5 456 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
CNOT1-222ENST00000570139 UBP1Q9NZI7 540 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 PRKAB1Q9Y478 270 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 MED14O60244 1454 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 MYOM1P52179 1685 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
CNOT1-222ENST00000570139 GDF9O60383 454 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 MMP20O60882 483 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 PSAPP07602 524 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 RARAP10276 462 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 RHOQP17081 205 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 GARTP22102 1010 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 RASA3Q14644 834 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 PLEKHG4Q58EX7 1191 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 FIGNL1Q6PIW4 674 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 MICAL1Q8TDZ2 1067 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 ZCCHC2Q9C0B9 1178 aaKnown RBP9.37□□□□□ -0.91
CNOT1-222ENST00000570139 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 TLR6Q9Y2C9 796 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
CNOT1-222ENST00000570139 TTLL8A6PVC2 850 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-222ENST00000570139 PPP1R12AO14974 1030 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-222ENST00000570139 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 KIF4AO95239 1232 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 F11P03951 625 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 CELA3AP09093 270 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 FAM157BP0CG42 384 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 LMNB1P20700 586 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 CHMP4BP1P59074 171 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 HYAL2Q12891 473 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
CNOT1-222ENST00000570139 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 TAF7LQ5H9L4 462 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 TTBK2Q6IQ55 1244 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 AGMOQ6ZNB7 445 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 FAM196AQ6ZSG2 479 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 HPS1Q92902 700 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 PNMA5Q96PV4 448 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 OSMRQ99650 979 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 ZKSCAN3Q9BRR0 538 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 RUBCNLQ9H714 662 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
CNOT1-222ENST00000570139 ITPKAP23677 461 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
CNOT1-222ENST00000570139 PTCH1Q13635 1447 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 C6orf118Q5T5N4 469 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 XRN1Q8IZH2 1706 aaKnown RBP9.35□□□□□ -0.91
CNOT1-222ENST00000570139 GSX2Q9BZM3 304 aa9.35□□□□□ -0.91
CNOT1-222ENST00000570139 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 CCER2I3L3R5 266 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
CNOT1-222ENST00000570139 DNAJC6O75061 913 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 CDC45O75419 566 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
CNOT1-222ENST00000570139 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
CNOT1-222ENST00000570139 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 SHDQ96IW2 340 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 LRRC3Q9BY71 257 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 CCDC113Q9H0I3 377 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 SPC25Q9HBM1 224 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 COL4A3BPQ9Y5P4 624 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
CNOT1-222ENST00000570139 TULP4Q9NRJ4 1543 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 ENC1O14682 589 aa9.33□□□□□ -0.92
CNOT1-222ENST00000570139 SMAD7O15105 426 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms