RNA–Protein interactions for RNA: ENST00000568316.1

RBBP6-211, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 5

Gene RBBP6, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-211	ENST00000568316	PASK	Q96RG2	1323 aa		29.87	■■■□□ 2.37
RBBP6-211	ENST00000568316	CDK5RAP2	Q96SN8	1893 aa		29.87	■■■□□ 2.37
RBBP6-211	ENST00000568316	GPAA1	O43292	621 aa		29.86	■■■□□ 2.37
RBBP6-211	ENST00000568316	SDR42E1	Q8WUS8	393 aa		29.86	■■■□□ 2.37
RBBP6-211	ENST00000568316	STRBP	Q96SI9	672 aa	Known RBP	29.86	■■■□□ 2.37
RBBP6-211	ENST00000568316	FLT1	P17948	1338 aa		29.86	■■■□□ 2.37
RBBP6-211	ENST00000568316	HIP1	O00291	1037 aa		29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	PRKAB2	O43741	272 aa		29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	NBPF12	Q5TAG4	269 aa	Predicted RBP	29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	CCDC129	Q6ZRS4	1044 aa		29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	TEPSIN	Q96N21	525 aa		29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	HELLS	Q9NRZ9	838 aa		29.85	■■■□□ 2.37
RBBP6-211	ENST00000568316	NPM3	O75607	178 aa	Known RBP	29.84	■■■□□ 2.37
RBBP6-211	ENST00000568316	CWC27	Q6UX04	472 aa	Known RBP	29.84	■■■□□ 2.37
RBBP6-211	ENST00000568316	SLC4A4	Q9Y6R1	1079 aa		29.84	■■■□□ 2.37
RBBP6-211	ENST00000568316	FOCAD	Q5VW36	1801 aa		29.83	■■■□□ 2.37
RBBP6-211	ENST00000568316	RPAP1	Q9BWH6	1393 aa	Predicted RBP	29.83	■■■□□ 2.37
RBBP6-211	ENST00000568316	CELF2	O95319	508 aa	Known RBP	29.83	■■■□□ 2.37
RBBP6-211	ENST00000568316	SAP30BP	Q9UHR5	308 aa	Known RBP	29.83	■■■□□ 2.37
RBBP6-211	ENST00000568316	MCMDC2	Q4G0Z9	681 aa		29.82	■■■□□ 2.36
RBBP6-211	ENST00000568316	SH3BP5L	Q7L8J4	393 aa		29.82	■■■□□ 2.36
RBBP6-211	ENST00000568316	CHML	P26374	656 aa		29.81	■■■□□ 2.36
RBBP6-211	ENST00000568316	SSC5D	A1L4H1	1573 aa		29.81	■■■□□ 2.36
RBBP6-211	ENST00000568316	DDTL	A6NHG4	134 aa	Predicted RBP	29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	NF2	P35240	595 aa		29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	SLC4A8	Q2Y0W8	1093 aa		29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	SUPT20HL1	Q3ZLR7	823 aa		29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	CST9	Q5W186	159 aa		29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	ZNF589	Q86UQ0	364 aa	Predicted RBP	29.8	■■■□□ 2.36
RBBP6-211	ENST00000568316	TRPM7	Q96QT4	1865 aa		29.79	■■■□□ 2.36
RBBP6-211	ENST00000568316	PRKG1	Q13976	671 aa		29.79	■■■□□ 2.36
RBBP6-211	ENST00000568316	CSRNP1	Q96S65	589 aa		29.79	■■■□□ 2.36
RBBP6-211	ENST00000568316	DCP1A	Q9NPI6	582 aa	Predicted RBP	29.79	■■■□□ 2.36
RBBP6-211	ENST00000568316	PALD1	Q9ULE6	856 aa		29.79	■■■□□ 2.36
RBBP6-211	ENST00000568316	ATRNL1	Q5VV63	1379 aa		29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	NAV1	Q8NEY1	1877 aa		29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	GNAT2	P19087	354 aa		29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	ATP8A2	Q9NTI2	1148 aa		29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	MKRN1	Q9UHC7	482 aa	Known RBP	29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	FZD1	Q9UP38	647 aa		29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	COL2A1	P02458	1487 aa	Predicted RBP	29.78	■■■□□ 2.36
RBBP6-211	ENST00000568316	CCDC171	Q6TFL3	1326 aa		29.77	■■■□□ 2.36
RBBP6-211	ENST00000568316	APP	P05067	770 aa		29.77	■■■□□ 2.36
RBBP6-211	ENST00000568316	MCM9	Q9NXL9	1143 aa		29.77	■■■□□ 2.36
RBBP6-211	ENST00000568316	GSG1L2	A8MUP6	293 aa		29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	TTLL12	Q14166	644 aa	Predicted RBP	29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	IFFO2	Q5TF58	517 aa		29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	DDRGK1	Q96HY6	314 aa		29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	IL25	Q9H293	177 aa		29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	GBA2	Q9HCG7	927 aa	Predicted RBP	29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	DDX60L	Q5H9U9	1706 aa	Known RBP	29.76	■■■□□ 2.35
RBBP6-211	ENST00000568316	MYH1	P12882	1939 aa		29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	APLP1	P51693	650 aa		29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	VPS53	Q5VIR6	699 aa		29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	MOB2	Q70IA6	237 aa		29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	MIGA2	Q7L4E1	593 aa		29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	29.75	■■■□□ 2.35
RBBP6-211	ENST00000568316	TMEM88B	A6NKF7	163 aa		29.74	■■■□□ 2.35
RBBP6-211	ENST00000568316	SLURP2	P0DP57	97 aa		29.74	■■■□□ 2.35
RBBP6-211	ENST00000568316	RUFY2	Q8WXA3	655 aa		29.74	■■■□□ 2.35
RBBP6-211	ENST00000568316	HOOK2	Q96ED9	719 aa		29.74	■■■□□ 2.35
RBBP6-211	ENST00000568316	DHX36	Q9H2U1	1008 aa	Known RBP	29.74	■■■□□ 2.35
RBBP6-211	ENST00000568316	PATL2	C9JE40	543 aa	Known RBP	29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	CDC45	O75419	566 aa		29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	POLR3D	P05423	398 aa	Predicted RBP	29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	CYP2D6	P10635	497 aa		29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	C2orf69	Q8N8R5	385 aa		29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	BAZ2A	Q9UIF9	1905 aa	Known RBP	29.73	■■■□□ 2.35
RBBP6-211	ENST00000568316	PAPPA2	Q9BXP8	1791 aa		29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	FOXP2	O15409	715 aa		29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	HLA-DOA	P06340	250 aa		29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	TDO2	P48775	406 aa		29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	MFAP1	P55081	439 aa	Known RBP	29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	ANGEL1	Q9UNK9	670 aa	Known RBP	29.72	■■■□□ 2.35
RBBP6-211	ENST00000568316	RAD50	Q92878	1312 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	FAM196B	A6NMK8	535 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	USP17L12	C9JPN9	530 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	USP17L21	D6R901	530 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	PPP1R12B	O60237	982 aa	Predicted RBP	29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	EVX2	Q03828	476 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	DCAF15	Q66K64	600 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	IFNL3	Q8IZI9	196 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	NACAP1	Q9BZK3	213 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	PI4KB	Q9UBF8	816 aa		29.71	■■■□□ 2.35
RBBP6-211	ENST00000568316	CYP2D7	A0A087X1C5	515 aa		29.7	■■■□□ 2.35
RBBP6-211	ENST00000568316	GIMAP6	Q6P9H5	292 aa		29.7	■■■□□ 2.35
RBBP6-211	ENST00000568316	ARMC9	Q7Z3E5	817 aa		29.7	■■■□□ 2.35
RBBP6-211	ENST00000568316	TTC6	Q86TZ1	520 aa		29.7	■■■□□ 2.35
RBBP6-211	ENST00000568316	ABT1	Q9ULW3	272 aa	Known RBP	29.7	■■■□□ 2.35
RBBP6-211	ENST00000568316	SIPA1L1	O43166	1804 aa		29.7	■■■□□ 2.34
RBBP6-211	ENST00000568316	UBE2Q2L	H0YL09	131 aa		29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	SGSM2	O43147	1006 aa		29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	USP2	O75604	605 aa	Predicted RBP	29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	HSPD1	P10809	573 aa	Known RBP	29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	PLCD1	P51178	756 aa		29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	FKBP1B	P68106	108 aa		29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	CTR9	Q6PD62	1173 aa		29.69	■■■□□ 2.34
RBBP6-211	ENST00000568316	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	29.69	■■■□□ 2.34

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms