RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PICALMQ13492 652 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 TGFBRAP1Q8WUH2 860 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 FAM151AQ8WW52 585 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 AIDAQ96BJ3 306 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 CDCA5Q96FF9 252 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 IL25Q9H293 177 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 HELLSQ9NRZ9 838 aa21.66■■□□□ 1.06
COMMD4-222ENST00000568034 MKRN1Q9UHC7 482 aaKnown RBP21.66■■□□□ 1.06
COMMD4-222ENST00000568034 COL2A1P02458 1487 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-222ENST00000568034 PRKAB2O43741 272 aa21.65■■□□□ 1.06
COMMD4-222ENST00000568034 CHMLP26374 656 aa21.65■■□□□ 1.06
COMMD4-222ENST00000568034 TNNI2P48788 182 aa21.65■■□□□ 1.06
COMMD4-222ENST00000568034 MAPKAPK5Q8IW41 473 aa21.65■■□□□ 1.06
COMMD4-222ENST00000568034 SDR42E1Q8WUS8 393 aa21.65■■□□□ 1.06
COMMD4-222ENST00000568034 OSBPL5Q9H0X9 879 aaPredicted RBP21.65■■□□□ 1.06
COMMD4-222ENST00000568034 NAV1Q8NEY1 1877 aa21.64■■□□□ 1.06
COMMD4-222ENST00000568034 ATRNL1Q5VV63 1379 aa21.64■■□□□ 1.06
COMMD4-222ENST00000568034 HIP1O00291 1037 aa21.64■■□□□ 1.05
COMMD4-222ENST00000568034 ZNF589Q86UQ0 364 aaPredicted RBP21.64■■□□□ 1.05
COMMD4-222ENST00000568034 CRNKL1Q9BZJ0 848 aaKnown RBP21.64■■□□□ 1.05
COMMD4-222ENST00000568034 DIAPH3Q9NSV4 1193 aa21.64■■□□□ 1.05
COMMD4-222ENST00000568034 FOXP2O15409 715 aa21.63■■□□□ 1.05
COMMD4-222ENST00000568034 MCMDC2Q4G0Z9 681 aa21.63■■□□□ 1.05
COMMD4-222ENST00000568034 NBPF12Q5TAG4 269 aaPredicted RBP21.63■■□□□ 1.05
COMMD4-222ENST00000568034 CWC27Q6UX04 472 aaKnown RBP21.63■■□□□ 1.05
COMMD4-222ENST00000568034 SIPA1L1O43166 1804 aa21.63■■□□□ 1.05
COMMD4-222ENST00000568034 TRPM7Q96QT4 1865 aa21.62■■□□□ 1.05
COMMD4-222ENST00000568034 DDTLA6NHG4 134 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-222ENST00000568034 EPB41L4AQ9HCS5 686 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-222ENST00000568034 DCP1AQ9NPI6 582 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-222ENST00000568034 SLC4A4Q9Y6R1 1079 aa21.62■■□□□ 1.05
COMMD4-222ENST00000568034 GSG1L2A8MUP6 293 aa21.61■■□□□ 1.05
COMMD4-222ENST00000568034 USP5P45974 858 aa21.61■■□□□ 1.05
COMMD4-222ENST00000568034 MYH1P12882 1939 aa21.61■■□□□ 1.05
COMMD4-222ENST00000568034 CCDC171Q6TFL3 1326 aa21.6■■□□□ 1.05
COMMD4-222ENST00000568034 VPS53Q5VIR6 699 aa21.6■■□□□ 1.05
COMMD4-222ENST00000568034 CST9Q5W186 159 aa21.6■■□□□ 1.05
COMMD4-222ENST00000568034 BAZ2AQ9UIF9 1905 aaKnown RBP21.59■■□□□ 1.05
COMMD4-222ENST00000568034 GNAT2P19087 354 aa21.59■■□□□ 1.05
COMMD4-222ENST00000568034 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
COMMD4-222ENST00000568034 SAP30BPQ9UHR5 308 aaKnown RBP21.59■■□□□ 1.05
COMMD4-222ENST00000568034 RAD50Q92878 1312 aa21.58■■□□□ 1.05
COMMD4-222ENST00000568034 CELF2O95319 508 aaKnown RBP21.58■■□□□ 1.05
COMMD4-222ENST00000568034 SLURP2P0DP57 97 aa21.58■■□□□ 1.05
COMMD4-222ENST00000568034 EVX2Q03828 476 aa21.58■■□□□ 1.05
COMMD4-222ENST00000568034 PALD1Q9ULE6 856 aa21.58■■□□□ 1.05
COMMD4-222ENST00000568034 PAPPA2Q9BXP8 1791 aa21.58■■□□□ 1.04
COMMD4-222ENST00000568034 PATL2C9JE40 543 aaKnown RBP21.57■■□□□ 1.04
COMMD4-222ENST00000568034 SGSM2O43147 1006 aa21.57■■□□□ 1.04
COMMD4-222ENST00000568034 SUPT20HL1Q3ZLR7 823 aa21.57■■□□□ 1.04
COMMD4-222ENST00000568034 CSRNP1Q96S65 589 aa21.57■■□□□ 1.04
COMMD4-222ENST00000568034 ZNF408Q9H9D4 720 aa21.57■■□□□ 1.04
COMMD4-222ENST00000568034 FZD1Q9UP38 647 aa21.57■■□□□ 1.04
COMMD4-222ENST00000568034 CDC45O75419 566 aa21.56■■□□□ 1.04
COMMD4-222ENST00000568034 CYP2D6P10635 497 aa21.56■■□□□ 1.04
COMMD4-222ENST00000568034 HSPD1P10809 573 aaKnown RBP21.56■■□□□ 1.04
COMMD4-222ENST00000568034 GIMAP6Q6P9H5 292 aa21.56■■□□□ 1.04
COMMD4-222ENST00000568034 ZSCAN29Q8IWY8 852 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-222ENST00000568034 IFNL3Q8IZI9 196 aa21.56■■□□□ 1.04
COMMD4-222ENST00000568034 DHX36Q9H2U1 1008 aaKnown RBP21.56■■□□□ 1.04
COMMD4-222ENST00000568034 MCM9Q9NXL9 1143 aa21.56■■□□□ 1.04
COMMD4-222ENST00000568034 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 PLCD1P51178 756 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 MAP3K10Q02779 954 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 SLC4A8Q2Y0W8 1093 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 MOB2Q70IA6 237 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 METTL16Q86W50 562 aaKnown RBP21.55■■□□□ 1.04
COMMD4-222ENST00000568034 ESYT1Q9BSJ8 1104 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 DNAJC18Q9H819 358 aa21.55■■□□□ 1.04
COMMD4-222ENST00000568034 CTR9Q6PD62 1173 aa21.54■■□□□ 1.04
COMMD4-222ENST00000568034 RUFY2Q8WXA3 655 aa21.54■■□□□ 1.04
COMMD4-222ENST00000568034 GBA2Q9HCG7 927 aaPredicted RBP21.54■■□□□ 1.04
COMMD4-222ENST00000568034 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
COMMD4-222ENST00000568034 OTOFQ9HC10 1997 aa21.54■■□□□ 1.04
COMMD4-222ENST00000568034 LAMB1P07942 1786 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 CYP2D7A0A087X1C5 515 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 USP17L12C9JPN9 530 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 USP17L21D6R901 530 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 USP2O75604 605 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-222ENST00000568034 NF2P35240 595 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 APLP1P51693 650 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 MFAP1P55081 439 aaKnown RBP21.53■■□□□ 1.04
COMMD4-222ENST00000568034 GABPAQ06546 454 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 ALX1Q15699 326 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 MAP3K11Q16584 847 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 MIGA2Q7L4E1 593 aa21.53■■□□□ 1.04
COMMD4-222ENST00000568034 TMEM88BA6NKF7 163 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 FAM196BA6NMK8 535 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 TBC1D12O60347 775 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 APPP05067 770 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 PRKG1Q13976 671 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 C12orf60Q5U649 245 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 EHD4Q9H223 541 aa21.52■■□□□ 1.04
COMMD4-222ENST00000568034 ARPP21Q9UBL0 812 aaPredicted RBP21.52■■□□□ 1.04
COMMD4-222ENST00000568034 ZMYM6O95789 1325 aa21.52■■□□□ 1.03
COMMD4-222ENST00000568034 POLR3DP05423 398 aaPredicted RBP21.51■■□□□ 1.03
COMMD4-222ENST00000568034 HLA-DOAP06340 250 aa21.51■■□□□ 1.03
COMMD4-222ENST00000568034 TDO2P48775 406 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms