RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-206ENST00000564934 FRAT2O75474 233 aaPredicted RBP16.53■□□□□ 0.24
RPAP1-206ENST00000564934 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 TJAP1Q5JTD0 557 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 LMBR1LQ6UX01 489 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 SCYL3Q8IZE3 742 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 TRIB2Q92519 343 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 MRIQ9BWK5 157 aa16.53■□□□□ 0.24
RPAP1-206ENST00000564934 MAST3O60307 1309 aa16.52■□□□□ 0.24
RPAP1-206ENST00000564934 PTPRAP18433 802 aa16.52■□□□□ 0.24
RPAP1-206ENST00000564934 TTYH1Q9H313 450 aaPredicted RBP16.52■□□□□ 0.24
RPAP1-206ENST00000564934 PICK1Q9NRD5 415 aa16.52■□□□□ 0.24
RPAP1-206ENST00000564934 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
RPAP1-206ENST00000564934 AK9Q5TCS8 1911 aa16.52■□□□□ 0.23
RPAP1-206ENST00000564934 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
RPAP1-206ENST00000564934 NFIAQ12857 509 aa16.51■□□□□ 0.23
RPAP1-206ENST00000564934 HHIPL2Q6UWX4 724 aa16.51■□□□□ 0.23
RPAP1-206ENST00000564934 LINS1Q8NG48 757 aa16.51■□□□□ 0.23
RPAP1-206ENST00000564934 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
RPAP1-206ENST00000564934 AGTPBP1Q9UPW5 1226 aa16.51■□□□□ 0.23
RPAP1-206ENST00000564934 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
RPAP1-206ENST00000564934 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
RPAP1-206ENST00000564934 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPAP1-206ENST00000564934 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 DNAAF4Q8WXU2 420 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 PTPRFP10586 1907 aa16.5■□□□□ 0.23
RPAP1-206ENST00000564934 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
RPAP1-206ENST00000564934 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
RPAP1-206ENST00000564934 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
RPAP1-206ENST00000564934 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
RPAP1-206ENST00000564934 FLIIQ13045 1269 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 FKBP5Q13451 457 aaPredicted RBP16.48■□□□□ 0.23
RPAP1-206ENST00000564934 SHHQ15465 462 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 CDC42EP5Q6NZY7 148 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
RPAP1-206ENST00000564934 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
RPAP1-206ENST00000564934 FAM198AQ9UFP1 575 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 ATRNL1Q5VV63 1379 aa16.48■□□□□ 0.23
RPAP1-206ENST00000564934 CYP2B6P20813 491 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 C9orf50Q5SZB4 431 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 ZFPM1Q8IX07 1006 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 USP38Q8NB14 1042 aa16.47■□□□□ 0.23
RPAP1-206ENST00000564934 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.23
RPAP1-206ENST00000564934 NCOR1O75376 2440 aa16.46■□□□□ 0.23
RPAP1-206ENST00000564934 LHX8Q68G74 356 aa16.46■□□□□ 0.23
RPAP1-206ENST00000564934 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
RPAP1-206ENST00000564934 PRKAG2Q9UGJ0 569 aa16.46■□□□□ 0.23
RPAP1-206ENST00000564934 DAGLAQ9Y4D2 1042 aa16.46■□□□□ 0.23
RPAP1-206ENST00000564934 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
RPAP1-206ENST00000564934 DNAH12Q6ZR08 3092 aa16.45■□□□□ 0.22
RPAP1-206ENST00000564934 CCND3P30281 292 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-206ENST00000564934 GCLCP48506 637 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-206ENST00000564934 SMAD3P84022 425 aaKnown RBP16.45■□□□□ 0.22
RPAP1-206ENST00000564934 CACNB2Q08289 660 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-206ENST00000564934 RALBP1Q15311 655 aa16.45■□□□□ 0.22
RPAP1-206ENST00000564934 SENP6Q9GZR1 1112 aaPredicted RBP16.45■□□□□ 0.22
RPAP1-206ENST00000564934 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
RPAP1-206ENST00000564934 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
RPAP1-206ENST00000564934 ATN1P54259 1190 aaPredicted RBP16.44■□□□□ 0.22
RPAP1-206ENST00000564934 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
RPAP1-206ENST00000564934 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
RPAP1-206ENST00000564934 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
RPAP1-206ENST00000564934 DOCK2Q92608 1830 aa16.44■□□□□ 0.22
RPAP1-206ENST00000564934 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
RPAP1-206ENST00000564934 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
RPAP1-206ENST00000564934 SLURP2P0DP57 97 aa16.43■□□□□ 0.22
RPAP1-206ENST00000564934 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
RPAP1-206ENST00000564934 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
RPAP1-206ENST00000564934 USP40Q9NVE5 1235 aa16.43■□□□□ 0.22
RPAP1-206ENST00000564934 APAF1O14727 1248 aa16.42■□□□□ 0.22
RPAP1-206ENST00000564934 XRCC5P13010 732 aaKnown RBP16.42■□□□□ 0.22
RPAP1-206ENST00000564934 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
RPAP1-206ENST00000564934 NUDT12Q9BQG2 462 aa16.42■□□□□ 0.22
RPAP1-206ENST00000564934 CTNND1O60716 968 aaKnown RBP16.41■□□□□ 0.22
RPAP1-206ENST00000564934 RGS3P49796 1198 aa16.41■□□□□ 0.22
RPAP1-206ENST00000564934 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
RPAP1-206ENST00000564934 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
RPAP1-206ENST00000564934 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
RPAP1-206ENST00000564934 SOCS4Q8WXH5 440 aa16.41■□□□□ 0.22
RPAP1-206ENST00000564934 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
RPAP1-206ENST00000564934 BDP1A6H8Y1 2624 aa16.41■□□□□ 0.22
RPAP1-206ENST00000564934 F6X3S4 739 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 GRM8O00222 908 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
RPAP1-206ENST00000564934 HMGCS2P54868 508 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 RTP1P59025 263 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 PABPC4Q13310 644 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPAP1-206ENST00000564934 CCL14Q16627 93 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 BEND3Q5T5X7 828 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
RPAP1-206ENST00000564934 ADAMTS19Q8TE59 1207 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
RPAP1-206ENST00000564934 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
RPAP1-206ENST00000564934 PEX10O60683 326 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms