RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CCDC9Q9Y3X0 531 aaKnown RBP8.25□□□□□ -1.09
LINC00254-201ENST00000563416 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
LINC00254-201ENST00000563416 ACSS3Q9H6R3 686 aa8.24□□□□□ -1.09
LINC00254-201ENST00000563416 PCDHGC5Q9Y5F6 944 aa8.24□□□□□ -1.09
LINC00254-201ENST00000563416 ITGB7P26010 798 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 LIG3P49916 1009 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 ERVK-24P63145 666 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 MAP3K11Q16584 847 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
LINC00254-201ENST00000563416 PICK1Q9NRD5 415 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 PCDHA4Q9UN74 947 aa8.23□□□□□ -1.09
LINC00254-201ENST00000563416 RBM47A0AV96 593 aaKnown RBP8.22□□□□□ -1.09
LINC00254-201ENST00000563416 NFICP08651 508 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 PWP1Q13610 501 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
LINC00254-201ENST00000563416 RASIP1Q5U651 963 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 SEMA6CQ9H3T2 930 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
LINC00254-201ENST00000563416 TTLL4Q14679 1199 aa8.21□□□□□ -1.1
LINC00254-201ENST00000563416 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
LINC00254-201ENST00000563416 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.1
LINC00254-201ENST00000563416 RNF214Q8ND24 703 aa8.21□□□□□ -1.1
LINC00254-201ENST00000563416 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.1
LINC00254-201ENST00000563416 DISC1Q9NRI5 854 aa8.21□□□□□ -1.1
LINC00254-201ENST00000563416 EIF4G1Q04637 1599 aaKnown RBP8.21□□□□□ -1.1
LINC00254-201ENST00000563416 RNGTTO60942 597 aaKnown RBP8.2□□□□□ -1.1
LINC00254-201ENST00000563416 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
LINC00254-201ENST00000563416 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
LINC00254-201ENST00000563416 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
LINC00254-201ENST00000563416 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
LINC00254-201ENST00000563416 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
LINC00254-201ENST00000563416 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 HCLS1P14317 486 aaPredicted RBP8.19□□□□□ -1.1
LINC00254-201ENST00000563416 CPSF6Q16630 551 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC00254-201ENST00000563416 HDXQ7Z353 690 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 GAL3ST3Q96A11 431 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 METTL22Q9BUU2 404 aaPredicted RBP8.19□□□□□ -1.1
LINC00254-201ENST00000563416 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 PCOLCE2Q9UKZ9 415 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
LINC00254-201ENST00000563416 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 FANCGO15287 622 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 ZAR1Q86SH2 424 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 FBXL6Q8N531 539 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 SHKBP1Q8TBC3 707 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 RSRP1Q9BUV0 290 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 CSADQ9Y600 493 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 SNCAIPQ9Y6H5 919 aa8.18□□□□□ -1.1
LINC00254-201ENST00000563416 WDR64B1ANS9 1081 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 CYP27A1Q02318 531 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 SEPT6Q14141 434 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 ZDHHC13Q8IUH4 622 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 KCT2Q8NC54 265 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 OSBPL1AQ9BXW6 950 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
LINC00254-201ENST00000563416 TFE3P19532 575 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-201ENST00000563416 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-201ENST00000563416 GRIK1P39086 918 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 WIPI1Q5MNZ9 446 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-201ENST00000563416 CDC37L1Q7L3B6 337 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 HS2ST1Q7LGA3 356 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
LINC00254-201ENST00000563416 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC00254-201ENST00000563416 ISL2Q96A47 359 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 TLR6Q9Y2C9 796 aa8.16□□□□□ -1.1
LINC00254-201ENST00000563416 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 LMNB2Q03252 620 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
LINC00254-201ENST00000563416 RING1Q06587 406 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 INPP5AQ14642 412 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 DUSP27Q5VZP5 1158 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 LRFN4Q6PJG9 635 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 SEZ6L2Q6UXD5 910 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 LGR6Q9HBX8 967 aa8.15□□□□□ -1.1
LINC00254-201ENST00000563416 F13BP05160 661 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 NEFMP07197 916 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 CAMK2GQ13555 558 aaPredicted RBP8.14□□□□□ -1.11
LINC00254-201ENST00000563416 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
LINC00254-201ENST00000563416 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
LINC00254-201ENST00000563416 RGS22Q8NE09 1264 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 C1GALT1Q9NS00 363 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
LINC00254-201ENST00000563416 DYNC1LI2O43237 492 aaPredicted RBP8.13□□□□□ -1.11
LINC00254-201ENST00000563416 COBLO75128 1261 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 BPNT1O95861 308 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 TGFB1P01137 390 aa8.13□□□□□ -1.11
LINC00254-201ENST00000563416 VAMP1P23763 118 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms