RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LIG3P49916 1009 aa16.05■□□□□ 0.16
GTF3C1-203ENST00000562609 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
GTF3C1-203ENST00000562609 DHX58Q96C10 678 aa16.05■□□□□ 0.16
GTF3C1-203ENST00000562609 TJP1Q07157 1748 aa16.05■□□□□ 0.16
GTF3C1-203ENST00000562609 CCDC189A1A4V9 331 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 GOLGA8FQ08AF8 430 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 GOLGA8DPQ0D2H9 430 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 EGFL6Q8IUX8 553 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 BCL9O00512 1426 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 H3BQV1 296 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 TAF5LO75529 589 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 ADORA1P30542 326 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 HNRNPH1P31943 449 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 HNRNPLLQ8WVV9 542 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 BRF1Q92994 677 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 HAUS7Q99871 368 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 PPP2R2CQ9Y2T4 447 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 JAK2O60674 1132 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 DDB1Q16531 1140 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
GTF3C1-203ENST00000562609 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 ZNF609O15014 1411 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 LMOD1P29536 600 aaPredicted RBP16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 FBXW10Q5XX13 1052 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 CEP126Q9P2H0 1117 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 L1RE1Q9UN81 338 aa16.03■□□□□ 0.16
GTF3C1-203ENST00000562609 MED23Q9ULK4 1368 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 PI16Q6UXB8 463 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 FAM71BQ8TC56 605 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 GREM2Q9H772 168 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 ANKZF1Q9H8Y5 726 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 ABCB6Q9NP58 842 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 PAG1Q9NWQ8 432 aa16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.16
GTF3C1-203ENST00000562609 ERLIN1O75477 346 aa16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 KCNQ4P56696 695 aa16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 KCNV1Q6PIU1 500 aa16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 KCNB2Q92953 911 aa16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 PNKPQ96T60 521 aa16.02■□□□□ 0.15
GTF3C1-203ENST00000562609 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 A0A0G2JLW4 131 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 FANCCQ00597 558 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 IFIT5Q13325 482 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 PUF60Q9UHX1 559 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 USP8P40818 1118 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 MARCH10Q8NA82 808 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
GTF3C1-203ENST00000562609 BIN1O00499 593 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 KCNQ2O43526 872 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 ANKRD1Q15327 319 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 PTPN21Q16825 1174 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 KBTBD3Q8NAB2 608 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 RCOR1Q9UKL0 485 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
GTF3C1-203ENST00000562609 ATP1A3P13637 1013 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 PSMA5P28066 241 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 USP5P45974 858 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 ME1P48163 572 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 SCARF1Q14162 830 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 CASP8Q14790 479 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 PPP2R5AQ15172 486 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 FCHSD1Q86WN1 690 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
GTF3C1-203ENST00000562609 CEP120Q8N960 986 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 CCDC12Q8WUD4 166 aaPredicted RBP16■□□□□ 0.15
GTF3C1-203ENST00000562609 SPATA31A1Q5TZJ5 1347 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 ITGA6P23229 1130 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 ADD1P35611 737 aaKnown RBP16■□□□□ 0.15
GTF3C1-203ENST00000562609 FOSBP53539 338 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 MCMDC2Q4G0Z9 681 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 XAGE2Q96GT9 111 aa16■□□□□ 0.15
GTF3C1-203ENST00000562609 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 ARHGAP6O43182 974 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 WDHD1O75717 1129 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 SCP2P22307 547 aa15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
GTF3C1-203ENST00000562609 LDHAL6AQ6ZMR3 332 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms